Physeter macrocephalus (sperm whale): 102975353
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Entry
102975353 CDS
T06011
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04120
Ubiquitin mediated proteolysis
pcad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102975353 (UBE4B)
04120 Ubiquitin mediated proteolysis
102975353 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102975353 (UBE4B)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102975353 (UBE4B)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
U-box type E3
102975353 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
102975353
NCBI-ProteinID:
XP_023981470
Ensembl:
ENSPCTG00005003542
UniProt:
A0A2Y9SY25
LinkDB
All DBs
Position
3:complement(24782498..24910816)
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AA seq
1202 aa
AA seq
DB search
MRVIRHVSVGTDDLRVHISCLRSGPKSPAAPAWQTVRIRRRRLARLAGGQTSQPNTPLTS
PQRESPPGPPVAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSN
SLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGS
EVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLM
MSSQTRDENPFASLTATSQPIAAAARSPDRSLMLNTGSNPGTSPMFCSVGSFGASSLSSL
GASGGASTWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNI
RSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIF
IPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLPLWLPKSLSPG
SGRELQRLSYLGAFFSFSVFAEDDTKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQEL
FKILHSILLNGETREAALGYMAAVVNANMKKAQMQTDDRLVSTDGLMLNFLWVLQQLSTK
IKLETVDPTYIFHPRCRITLPSDETRVNATMDDVNDWLTELYGDQSPFSEPKFPTECFFL
TLHAHHLSILPGCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLAARHREMLKRCKTQL
KKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDVTLPLSSDVPKVFAAL
PEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFM
TNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIF
KSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQ
WDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAM
LNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSK
ELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTL
MTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHTWMREKQNN
DH
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcatccgccatgtcagtgttggtactgatgacctgcgagttcatatctcctgc
ctgcgatctggacccaaatctccagctgccccagcctggcagacggtgaggatccgacgg
aggcgcctggcacgacttgctggtggacagacctcccagccaaacaccccgctcacctct
ccccagagggagagccctccggggcctcctgtagcagcctcagccccgggcccgtcccag
agtcttggtctcaatgtccacaacatgaccccagctacctcccccataggtgcatcagga
gtagcccatcgaagccagagcagtgaaggagtcagttctctcagcagctcgccctccaat
agccttgaaacacaatctcagtctctctcacgttcccagagcatggatatcgatggagtc
tcttgtgaaaaaagcatgtcccaggtggatgtggattcaggaattgaaaatatggaagtt
gatgaaaatgaccgaagagaaaaaaggagcctcagcgataaggagccttcatcaggttct
gaagtgtctgaagaacaggccttacagctggtctgtaagatcttccgtgtctcctggaag
gaccgggacagagatgtcatctttctttcttctctttctgcacaatttaagcagaaccca
aaagaagtgttctctgattttaaggacttgattggccagattttaatggaagtgctaatg
atgtcctctcagactagagatgaaaacccatttgccagtctgacagccacgtcccagcca
attgcagcagcagctcggtcgccagacagaagtctcatgctaaataccggctccaatccg
ggaacgagccccatgttctgcagcgtgggttccttcggtgccagctctttatctagtttg
ggagcctctggtggggcaagtacttgggattcctacagcgaccatttcaccattgagacg
tgcaaagagacagatatgctgaactacctcatcgagtgttttgaccgagttggaatagag
gaaaaaaaagcaccgaagatgtgcagccagccagcagtcagccagcttctgagcaacatc
cgctcacagtgcatatcccatactgcattagtactacaagggtccctcacacaaccaagg
tccctgcagcagccgtccttcctggtgccgtacatgctgtgtaggaatctcccatacggc
ttcattcaagaactagtgagaacgactcaccaggatgaagaagtgttcaagcagatcttt
atccccattttacaaggcctggctcttgctgccaaagagtgctccctcgatagtgactac
tttaaataccccctcatggctttaggtgagctctgtgaaaccaagtttggaaagacacac
cctgtgtgcaatttggttgcttctttgcctttgtggttgcctaaatcattaagccctggc
tctgggcgggagctgcagagactctcgtatttgggggctttctttagcttctcagtcttt
gcagaggatgatacaaaagtggttgaaaaatatttctcagggcctgccattaccctggaa
aacactcgtgtggtgagccagtcactgcagcattacttggagctgggaaggcaagagctt
ttcaagattctgcatagtattctgttaaacggagaaacccgtgaggctgctcttggttac
atggcagctgtcgtcaatgccaatatgaagaaagcgcagatgcagacggatgatagattg
gtatctacagacggattgatgctgaatttcctttgggtgctgcagcagctaagcacaaag
atcaagttagagacggtcgaccccacgtacatattccacccgaggtgtcggattactctt
cccagcgatgagacgagagtgaatgcaacgatggacgacgtgaatgactggctgactgaa
ctttatggagatcagtctccgttttctgagccgaaattccctacggaatgcttctttctt
accctgcacgcccaccatctctcaattctgccgggttgccgacgctacatccgcagactc
cgggccatccgggagctcaacagaactgtggaagatttgaaaaacaatgaaagccaatgg
aaagactccccactggcagctagacaccgtgaaatgctgaagcgctgcaaaactcagctt
aagaaactggtacgatgcaaggcctgtgctgatgctggtttacttgacgagagcttcctg
agaagatgtctgaatttttacggccttctcattcagctgctgctgcgcatcctggaccct
gcctatcccgatgtcacactgcctttaagttcagatgtccccaaggtatttgcagcattg
cctgagttttatgtagaagatgttgctgaatttttattttttattgtacaatactctcct
caggtgctttatgagccctgtactcaggatattgtgatgttcctcgttgtgatgttgtgt
aaccagaactacatccgaaatccatatctggtcgccaaactcgtggaagtcatgtttatg
actaaccctgctgttcagccacggacccagaagttttttgaaatgattgagaaccatcct
ctctccaccaagctgttggtcccttccctgatgaagttttatacagatgttgagcatacc
ggagccaccagcgagttctatgacaagttcaccattcgctatcatattagcaccattttt
aaaagcctttggcaaaatatagctcaccatggcacctttatggaggagttcaattccggg
aagcagtttgtccgctatataaacatgctgataaacgacacgacatttttgctcgatgaa
agcctggagtctctgaagcggatccatgaagtgcaagaagagatgaagaacaaagaacag
tgggaccagctgccccgggatcagcagcaggcccgccagtcccagctcgctcaggatgag
cgcgtttcacgctcttatcttgccctggcgacagaaaccgtggacatgttccatatcctc
accaagcaggtccagaagccattcctcagacctgaactcggaccccgattggctgcgatg
ctgaactttaatcttcagcaactctgtggtcctaagtgccgtgacctgaaagttgaaaac
cctgagaaatatggctttgaaccaaagaagctgttggaccaactgacggatatttacttg
cagctggactgtgcccggttcgctaaagccattgctgacgaccagagatcctacagcaaa
gaattgtttgaagaagttatttcgaagatgcggaaggcagggatcaaatccacaatagcg
atagagaagtttaaacttctggctgagaaggtggaggagatcgtggccaagaacgcacgt
gcagaaatcgactacagtgacgccccagacgagttcagagaccctctgatggacaccctg
atgactgaccccgtgcggctgccctctggcactatcatggaccgctccatcatcctgcgg
cacttgctgaactcccccacggaccccttcaaccgacagacgctgacagagagtatgctg
gaaccagtgccggaactgaaagaacagattcatacctggatgagagagaaacagaacaat
gatcattaa
DBGET
integrated database retrieval system
