Physeter macrocephalus (sperm whale): 102975390
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Entry
102975390 CDS
T06011
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X3
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04136
Autophagy - other
pcad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102975390 (ATG4A)
04136 Autophagy - other
102975390 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcad01002
]
102975390 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102975390 (ATG4A)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102975390 (ATG4A)
Peptidases and inhibitors [BR:
pcad01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102975390 (ATG4A)
Membrane trafficking [BR:
pcad04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102975390 (ATG4A)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102975390 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
102975390
NCBI-ProteinID:
XP_028338347
Ensembl:
ENSPCTG00005013070
UniProt:
A0A455AP40
LinkDB
All DBs
Position
21:83265053..83354951
Genome browser
AA seq
403 aa
AA seq
DB search
MDLRIWGGKVLSKYENQITIFADYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLW
FTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWAKQKEQPKEYQRI
LQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMD
NTVVIEDIKKMCHTLPLSAETAAESPPECLNDSTQSKGPSACSPAWKPLLLIVPLRLGIN
QINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTENGTV
DDQTFHCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKH
PSHWPPFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaggatatgggggggcaaggttttatccaagtatgaaaaccagattactatt
ttcgctgactacctagaagaatttccagatacagatgagctggtatggatcttggggaaa
cagcatcttcttaaaaccgaaaaatctaagctgttgtctgatataagtgctcgtctatgg
tttacatacagaaggaaattttcaccaattgggggaacgggcccttcgtcagacgccggc
tggggatgtatgctacgctgtggacagatgatgctggctcaagcccttatctgcagacac
ttgggcagggactggaactgggcgaaacagaaagaacaacccaaagaataccaacgaatc
ctacagtgcttcctagatagaaaagactgttgctactctatccatcaaatggcacagatg
ggtgtaggagaagggaaatcaattggcgaatggtttggaccaaatacagttgcacaggtg
ttaaaaaaacttgctttatttgatgaatggaattccttggctgtttatgtttcaatggat
aacaccgtggttattgaagatatcaaaaaaatgtgccacaccctccccttgagtgccgaa
acagctgctgagagcccccctgagtgtctgaatgattcgacccagagtaagggcccctct
gcctgctctccagcctggaaacccttgctgcttattgtgcccctccgcctgggcataaac
caaatcaatcctgtctatgtcgacgccttcaaagagtgttttaagatgccacagtcttta
ggggcattaggaggaaaaccaaataacgcctattatttcataggattcttaggcgatgag
ctcattttcctggaccctcacacaacccagacctttgttgacactgagaacggaacggtt
gacgaccagactttccactgtctgcaacctccgcagcgaatgaacatcctgaacttggat
ccttccgtagcattgggatttttctgcaaagaagaaaaagactttgatagctggtgtagc
cttgttcagaaggaaattctaaaggaaaatttaaggatgtttgaattagttcagaaacat
ccatcacactggcctccctttgttcctccagccaagccagaagtgacaaccactggggca
gaattcatcgactctactgagcaactagaggagtttgacctggaggaagatttcgagatt
ctgagcatatag
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