Physeter macrocephalus (sperm whale): 102975423
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Entry
102975423 CDS
T06011
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03440
Homologous recombination
pcad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102975423 (PALB2)
03460 Fanconi anemia pathway
102975423 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102975423 (PALB2)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102975423 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102975423 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
RNR_Alpha
Motif
Other DBs
NCBI-GeneID:
102975423
NCBI-ProteinID:
XP_028354450
Ensembl:
ENSPCTG00005007390
UniProt:
A0A455BZH4
LinkDB
All DBs
Position
14:complement(63783191..63814279)
Genome browser
AA seq
1191 aa
AA seq
DB search
MLFLLAAGQMEEPPGKLLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKFKNSIKRT
VEGQDSSLQQEVSTQLTHTEPKNKVSPCDTLQINTHVDKETGEKTPVTLDLEPESFSPGV
PAEESRIQRSDDIREHFPYSVSGPDGKKRQSKLLGRRKKQERTFISQERESFFDIDSLVL
SGKRLKEQEEINRENPKTPVTEIRTYPSIPKSDIPDSPAPVTGANVGSVLILPNAKPQRD
VDALLRGSNFPRVTTLPLHAPSVSSSGQHLENKPPESNCKLTTHSLKNISPASPVNLETQ
DKKMTVFTDNPEVNKSISASGQPPRSPNLEADNSCSINEFTYDNLVVNENQNLKEQNHTE
MYFKSPNNALGGRNESLLEKEVLSQSKSLSLEVISPVSTENQTHSCTVLEGLLFPAEYYV
RTTRRMSDCQRKVALEAVIQSHLGVRKKGFKNKNKESAKKLNVSNEETNQSEIKMSDTYA
KQPSSKSPQKLLSLTEVNSPAGPTKDDFSRKAVTQPSGRKRKGRRKSVCTPLLDHHDLLL
PPSGTSGVTRSKEEVALHKDQNEKASIHEKEGHCQKEDFLSYSNYVYLSLDDDAFSSPVH
KSEMLNLKHLSPFLKIIDFQLPDEDFGPLKLEKLKSCSEKLMEPFGSKICGEGHLKGGNC
VPVEELTPKQIAIEKKDEKEELIILPGKAHPKMPSQKSQPQEKGLSSSILLFTPVNTVAS
GDNDRPTADLCSPAFPVLGSTPAFGSQAHGEKVSAEVVGQACSTPQLSHLKATVSLASDH
KQFWSSPPKLDSSLHVSGREGQPSHDCDSGPQVTPLPIESSTYKENQLRGNTCQESRKHS
TEQTEIADVPACDSLNPGTLQLVSKLKNPSGSCSVDVSAMLWEIAGFKEQCIITACEYVV
SLWKPLDTWQWEKIYSWHFAEVPVLQIVLVPDVCNLVCVALGNLEIREIRALLCSPDGKS
EKQVLLTSGNIKAVLGLTKRRLVSSGGTLCDQQVEIMTFAEDGGSKEKQFLMHPEETILT
FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVLS
HPCAKGSKLLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTSG
TIAIWDLLLGHCTALLPPVSDQNWSFVKWSGVDSHLLAGQKDGNIFVYRYY
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgctctttttgttggccgccggccagatggaagagcctcctgggaagctcctcagctgt
gaggagaaggaaaagttgaaggaaaaattagcattcttgaaaagggaatacagcaagaca
ctggcccgccttcagcgtgcccagagagctgagaagtttaagaattccattaagagaaca
gtagaaggacaagattcctctctccagcaggaagtttcaacgcagctaacccacacagaa
cctaaaaataaagtatctccttgtgacacgttacaaatcaacacccacgtcgataaagaa
actggagaaaagacacctgtcacacttgaccttgagcctgagtcctttagccctggagtc
ccagcagaagaatcacgcatacaaagatcagatgatatccgagaacattttccctacagc
gtcagtggccctgatggtaagaaaaggcagagtaagctgctagggagaagaaagaaacag
gagagaacatttatttcacaggagagagagtctttctttgacattgattcgctcgtactc
tctggaaaaaggctaaaggaacaggaagaaatcaatagagaaaatcctaaaacacctgta
actgagataagaacttacccgtcaattcctaagtctgacattcccgattctccagcacca
gttacaggagctaatgtagggagtgtattaattctgccaaacgccaaaccgcagagagat
gttgatgcactcttaagaggaagtaatttccccagggtgactactcttcctttgcatgct
ccatcagtcagcagtagtggtcagcaccttgagaataagcctcctgaaagtaactgtaaa
cttactactcacagtttaaaaaacattagccctgcttcgcctgtaaacttagagacacaa
gacaaaaaaatgactgtctttacagataacccagaggtaaacaaaagtataagtgcaagt
ggccagccacctagaagtcctaacttggaggcagataactcatgttctataaatgaattc
acctacgataacttagtggtaaatgaaaaccaaaacttaaaagaacaaaatcacacagag
atgtattttaaatctcccaataatgctcttggtggtagaaatgaaagtcttctggaaaaa
gaagttctaagtcagtctaagagtcttagcctagaagtaatttctcctgtttctacagaa
aatcaaacacattcttgcacagtgcttgaaggccttctatttcctgcagaatattatgtt
agaacaacacgacgcatgtcagattgccagaggaaggtagcactggaggctgtaatacaa
agtcacttgggtgtcagaaaaaaggggtttaaaaataaaaataaggaatctgctaaaaag
ttaaatgtttccaatgaagaaactaaccaaagtgaaattaagatgtcggacacgtacgca
aaacaaccaagttcaaaaagtcctcagaaacttctctcgttaactgaagtcaactctccc
gctggccccactaaagatgacttttctaggaaggcggttacccagccatctggtagaaaa
cgcaaaggaagaagaaagtcagtctgcacccctctgttggatcaccatgacctacttttg
ccaccttctggcacatcaggtgttactaggtccaaggaagaagttgccttgcacaaagat
cagaatgaaaaagcaagtattcatgagaaggaaggtcattgtcaaaaagaggacttcctt
tcttacagtaattacgtgtatttatctttggatgatgatgctttcagttctccagttcat
aagagtgaaatgctaaatttaaagcatctgtcgccttttctcaaaatcatagactttcag
ttacctgatgaagacttcgggcctcttaagcttgaaaaactgaagtcttgctcagaaaag
ctgatggagccttttggatcaaagatatgtggagagggacatcttaaagggggaaattgt
gttcctgtggaggaactgacccctaaacaaatcgctatagaaaagaaggatgagaaagag
gaactgatcatcctgccaggaaaggcacatcctaaaatgccaagccaaaaaagccagcct
caggagaagggcctttcttcatccattttacttttcactcctgtaaatactgttgcatct
ggtgataatgacagaccgacagcagacctgtgctcacccgctttccccgtcttaggctct
actccagcttttggctcccaagcccatggagaaaaggtgtctgcagaggttgttggacaa
gcttgctctacaccccagctttctcacttaaaagccacagtcagccttgctagtgaccat
aaacaattttggagcagcccaccaaaattagatagcagcctgcatgtgtcaggaagggaa
ggacagccttcccatgactgtgactctggtccccaagtaacacctctacccatcgagtca
tcaacctacaaagaaaatcagctccgtggaaacacatgccaggaatcacggaaacattcc
actgaacagactgaaatagcagacgttcctgcttgtgatagcttaaacccaggcacccta
caattggtttcaaagttaaagaatccttcaggttcctgttctgtggatgtgagtgccatg
ttgtgggaaatagctggtttcaaagagcagtgtatcataactgcttgtgaatacgtagtt
tctctttggaaacctctggatacttggcagtgggaaaaaatttattcctggcacttcgca
gaggtcccagtattacagatagttctagtgcctgatgtctgtaatcttgtgtgtgtggct
ttgggaaatttggaaatcagagaaatcagggcactactttgttctcctgatggtaaaagt
gaaaagcaagtgctcctgacttctggaaatataaaagctgtgcttggcctgacaaagagg
aggctagtcagtagcggtgggaccctttgtgatcaacaagtagaaatcatgacgtttgca
gaagatggaggaagcaaagaaaaacagtttttgatgcaccctgaagagactatactaact
tttgctgaggttcaagggatgcaggaagctctgcttggtaccactataatgaacaacatt
gttatttggaatttaaaaactggtcaactcctgaaaaagatgcacattggtgattcctac
caagcttcagtctgtcacaaagcttattctgaaatggggctcctgttcgttgttctgagt
cacccttgtgccaaagggagcaagttgttgggaagccctgtgtttcagctgattgtgatt
aacccaaagacgaccctgagtgtgggtgtgatgctctactgccttcctcaagggcaggct
ggaaggttcctggaaggtgacgtgaaagatcattttgcagcagcagtattaacttctgga
accattgccatttgggacttactcctaggtcattgcactgctctccttccacctgtctct
gaccagaactggtcttttgttaaatggtcaggtgtagattctcatttgctggctggacaa
aaagatggaaatatatttgtataccgctactactaa
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