Physeter catodon (sperm whale): 102975603
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Entry
102975603 CDS
T06011
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03050
Proteasome
pcad05010
Alzheimer disease
pcad05012
Parkinson disease
pcad05014
Amyotrophic lateral sclerosis
pcad05016
Huntington disease
pcad05017
Spinocerebellar ataxia
pcad05020
Prion disease
pcad05022
Pathways of neurodegeneration - multiple diseases
pcad05165
Human papillomavirus infection
pcad05169
Epstein-Barr virus infection
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102975603 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102975603 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102975603 (PSMC1)
05165 Human papillomavirus infection
102975603 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102975603 (PSMC1)
05012 Parkinson disease
102975603 (PSMC1)
05014 Amyotrophic lateral sclerosis
102975603 (PSMC1)
05016 Huntington disease
102975603 (PSMC1)
05017 Spinocerebellar ataxia
102975603 (PSMC1)
05020 Prion disease
102975603 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
102975603 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pcad03051
]
102975603 (PSMC1)
Proteasome [BR:
pcad03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
102975603 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_25
AAA_28
AAA_14
RNA_helicase
AAA_3
ATPase
IstB_IS21
TIP49
AAA_11
AAA_18
Mg_chelatase
Prot_ATP_ID_OB_N
AAA_7
AAA_33
Parvo_NS1
NB-ARC
PhoH
NACHT
AAA_24
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
102975603
NCBI-ProteinID:
XP_007102739
Ensembl:
ENSPCTG00005012043
UniProt:
A0A2Y9EH72
LinkDB
All DBs
Position
11:169273571..169286965
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagtcagagtggtggtcatggtcctggaggtggaaagaaggatgacaaggac
aagaaaaagaaatatgaacctcctgtaccaactagagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgcccctggtgacacctcacactcagtgccggtta
aaattattgaagttagagagaattaaagactatcttctcatggaggaagaattcattaga
aatcaagaacaaatgaagcctttagaagaaaagcaagaggaggaaagatcaaaggtggat
gatctgagagggaccccaatgtcggtaggaaccttggaagagatcattgatgacaatcat
gccatcgtgtctacgtctgtgggctcagaacactacgtcagcattctttcatttgtagac
aaggatctgctggaaccgggctgctcggtcctgctcaaccacaaggtgcatgctgtgata
ggggtgctgatggatgacacggatcccttggtcacagtgatgaaggtggaaaaggccccc
caggagacatatgctgatattggggggttagacaaccaaatccaggaaattaaggaatct
gtggagcttccactcactcatcctgaatattatgaagagatgggtataaagccccctaag
ggggtcattctgtatggtccacctggcacaggtaaaaccttactagccaaagcggtagca
aaccaaacctcggccactttcttgagagtggttggctctgaacttattcagaagtaccta
ggtgatgggcccaaacttgttcgggaactgtttcgagttgctgaagaacatgcaccgtcc
atcgtgtttattgatgaaattgatgctattgggacgaaaaggtatgactcaaattccggt
ggtgagagagaaattcagcgaacaatgttggaactgttgaaccagttggatgggtttgat
tcaaggggagacgtgaaagtcatcatggccacaaaccggatagagactttggacccagcc
cttatcagaccaggccgcatcgacaggaagattgagttccccttgcccgatgaaaagacg
aagaagcgcatctttcagatccacacgagcaggatgacgctagcagacgacgtaaccctg
gatgacttgatcatggctaaagatgacctctctggtgccgacatcaaggcaatctgtacg
gaagctggtctgatggccttgagagaacgtaggatgaaagtaacaaatgaagacttcaaa
aagtctaaagaaaatgttctttataaaaaacaagaaggcacccctgaggggctctatctc
tag
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integrated database retrieval system
