Physeter macrocephalus (sperm whale): 102975879
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Entry
102975879 CDS
T06011
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04120
Ubiquitin mediated proteolysis
pcad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102975879 (SYVN1)
04120 Ubiquitin mediated proteolysis
102975879 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102975879 (SYVN1)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102975879 (SYVN1)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102975879 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102975879
NCBI-ProteinID:
XP_007119324
Ensembl:
ENSPCTG00005014381
UniProt:
A0A2Y9FBY8
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAPHPP
PLLPQPPNFAQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGDAVAPPSTSAALSRPSAAA
TTTAGSAASAPAPGSTSTPDAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPE
ELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSANPTEETA
PTAVAAAFSTSTPSSEATTPSLGASPPAPEPEKPSAPESAGTEELPEDGEPDAAELRRRR
LQKLESPVAH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccaccgtggtgtacttgaccaagtctagc
cccagcatggcagtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttcttcggacagctgagggcagcagagatggagcatcttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcactgtttttcgggatgacttcagc
ccccgctttgttgcgctcttcactctccttcttttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctccctaatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccatcttcatcaagtacgtgctgcactctgtggacctccag
agcgagaatccctgggacaataaggccgtgtacatgctctacacggaactgtttacaggc
tttatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacactttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagctatccgcaacatgaacacactgtatccagacgccacc
ccagaggaactccaggcgatggacaacgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagaggcagcagacctgccccacctgccgtatggatgtccttcgggcgtcgctgccgacc
cagtcaccaccgccccctgagcccgcggatcaggggccaccacctgccccccaccccccg
ccactcctgccccagccccccaacttcgcccagggcctcctgcctcccttccctccaggc
atgttcccgctgtggccccccatgggcccctttcctcctgtcccacctccccccagctct
ggagacgctgtggcccctccgtccaccagtgcagccctttctcggcccagtgcagcagcc
acaaccacagctggttctgctgcctctgccccagcacctggctcgacctccacccctgac
gccggccccgccccaggcttccccttccctcccccctggatgggcatgccgctgcctcca
ccctttgccttccccccgatgcctgtgcctcctgccggctttgctgggctgaccccagag
gagctgcgggctctggaaggccacgagcggcagcacctggaggcccggctacagagcctg
cgcaacatccacacgctgctggatgccgccatgctgcagatcaaccagtacctcaccgtg
ctcgcctccctcgggcccccccggcctgccacctcagccaaccccactgaggagaccgcc
cctacagctgtcgctgctgccttctccaccagcacccccagctctgaggccaccacccca
tccctgggagcctccccaccagcccctgaacctgaaaagccttcagctcccgagtcagcg
ggcaccgaggagctgcctgaggatggggagcctgacgcagcagagctccgccgccgtcgc
ctgcaaaagttggagtcccctgttgcccactga
DBGET
integrated database retrieval system
