Physeter macrocephalus (sperm whale): 102975957
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Entry
102975957 CDS
T06011
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X2
KO
K20826
RNA polymerase II-associated protein 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102975957 (RPAP1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102975957 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
102975957
NCBI-ProteinID:
XP_007111774
Ensembl:
ENSPCTG00005018667
UniProt:
A0A2Y9EZY7
LinkDB
All DBs
Position
11:97018511..97037366
Genome browser
AA seq
1455 aa
AA seq
DB search
MRRKESTEPWKKEPFLMHKKENQGSVAEGPSSLLLLGVNESEFPTRKQCWKESHEGGSWS
VKMLSRPKPGESEVDLLHFQSQFLAAGAAPAVQLVKKGSRSGGDANPDRPPLRDHRDVVM
LDNLPDLPPALVPAPPKRARPSPGHPLPEHEDPEERLNRHDKHITAVLTKIIERDTSSVA
VNLPVPSGVAFPPVFHRSQGRQGKPATSGKKSIFAQEIAARRASEAKVPPVGEVASTLDP
PEGAATCEALTPREQGSQLPWNSYSFQGPHLVTGKGLKSQEAEQEAQTIHEENVARLQAM
APEEILQEQQRLLAQLDPSLVAFLRSHSRTCEQAEEKATGEQRPGGRSAEVTGEEPIMPT
SASEPRQEDELEPGAPALALPVTPQKEWLHMDTVELEKLHWTQDLPPLRRQQTQERMQAR
FSLQGELLAPSVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVI
GRAQVGEFGDRLVGSVLRLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRALLVAPGDEEL
LDSTFSWYHGALVFPLMPSQEDKEDEDEDEEPPAEKAKRKSPEEGNRPPSDVARHDVIKG
LLATNLLPRLRYLLEVTCPGPSAVLDILAVLIRLARHSLESATRVLECPRLIETVIQEFL
PTSWSPMGVRPTLSLHRMPCAPAMKLLRVLASAGRNIAARLLSGFDLRSRLCRFIAEAPQ
DLALPPEEAETLSTEAFRLWAVAASYGQGGDLYRELYPVLTRALQAVPKELSSPSPQPLA
LQRAASLLTVLTQLTLAAGSTAPEPRSDSAEASLSSTPSSITWTQVSGLQPLVEPCLRQT
LKLLPRPEMWTALGPVPTACLLFLDAYYQAWSQQPGLCPGDWLQDTERLSEELLLPLLSQ
PALGRLWHSLGCCSPLCNPQSCAPAPEALPSLVSLGCAGGHPPLSLAGSASPFPFLTALL
SLFNTLGWIHKGLCGQLAAVLAAPGLQNYFLQCVAPVAAPHLTPFSAWALRHEYHLQHLA
LALAQRAATLQPVSATSAALYHGMALALLSRLLPGSEHLAHELLLSCVFRLEFLPEGASG
GPEAADFSDRLSLGSGGDLGCERGTLLAQACQDLPSIRSCYLTHCSLARASLLASQALHR
GELQQVPALLLPVAKEPLLPTDWPFLPLIQLYHRASDSPSGLPPADTVGTAMRALQWVLV
LESWRPQALRAVPPAARLARLMCVFLVDSELFRETPIQRLVAALLARLCQPEVLPNLNLD
CPLPGLTSFPDLYANFLEHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRA
LGLPLTQLPVSLESYTAPPEDNLALLQLYFRALVTGALQSRWCPVLYAVAVAHVNSFIFC
QDPKSSDEVKAARRSMLQKTWLLADEGLRQHLLHYKLPNSALPEGFELYPQLPPLRQQYL
QKLISGVLQNGVSET
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaaagagtccaccgaaccctggaagaaggagccttttctgatgcacaaaaaa
gagaatcagggttcagttgcagagggcccatcatctttactgcttctaggagtaaatgag
agtgaattccctacacggaagcagtgctggaaagagtcccacgagggaggcagctggagt
gtcaagatgctgtcaagaccaaagccaggggagtccgaggtggacctgctgcacttccag
agtcagtttcttgcagctggtgcagccccagcagtacaactggtgaagaaaggaagtagg
agtggtggtgatgctaacccggaccggcctccactgcgggatcatcgggatgtggtgatg
ctggacaatctcccagacttgcccccagctttggttcctgctcccccaaagagagccagg
cccagccccggccatcccctgcctgaacatgaggaccctgaagagaggctgaacaggcat
gataagcacatcactgctgtcttgactaagattattgaacgagatacaagttcagtggct
gtgaatctgcctgtgccctctggcgttgctttccctcctgtattccatcgctcacagggg
agacaggggaagccagcaacatctggtaagaaaagtatctttgcccaggaaattgcagca
aggagagcatctgaagccaaggtcccaccagttggagaagttgcatctaccttggaccca
ccagagggtgctgcaacctgtgaggcactcacacctagggagcagggcagccagcttcca
tggaacagctacagcttccagggaccccatctggttacagggaaggggctcaagagccag
gaggctgagcaggaagcccagaccatccatgaagagaacgtagcgagactgcaagccatg
gctccagaggagatcctgcaggaacagcagcggttactggctcagcttgatcccagcttg
gttgccttcttgagatctcacagccgcacctgtgagcaggcagaagagaaggccacgggg
gagcagaggccaggaggtcgctctgctgaggtcactggagaggagcccatcatgccaact
tctgccagtgagcccaggcaggaagacgagctggagccaggagccccagctctggcactg
cccgtgactccccagaaagaatggctgcacatggacactgttgagctggagaagctccat
tggacccaagacctacctccactccgacggcagcagactcaggagaggatgcaggcccga
ttcagtcttcagggagagctgctggcccccagcgtggaccttcccacccatctgggccta
caccaccatggagaggaggcggagagagcagggtactcccttcaggagctgttccacctg
acgcgcagccaggtgtcccagcagagagcactagcgctgcatgtgttggcccaggtcatt
ggcagggcccaggttggcgagtttggggaccggctagtgggcagtgtcttgcgcctcctt
ttggatgctggtttcctcttcctgctgcgcttctctctggatgacagagtggatggggtc
atcgcagctgctgtccgggctcttcgggctctgctggtggctcctggagatgaggagctc
ctcgatagcaccttctcttggtaccatggagctttggtgttccctctgatgcccagccag
gaggacaaggaggacgaggatgaggatgaagagcccccagcagaaaaggcaaaaaggaag
agcccagaggaaggaaaccggcctccatctgatgtggcccgacatgacgtcatcaagggg
ctcctggccaccaacctgctgcctcggctacgctacttgctggaggtgacctgcccagga
ccttctgcggtccttgacatcctggctgtgctcatccgcctggcccggcattccctggag
tcagccacaagggtcctggagtgccctcggctgatagagactgtgattcaagagttcctg
cccaccagctggtcccctatgggggtgaggcctaccctcagtctacacagaatgccctgt
gctcctgccatgaaacttcttcgtgtcctggcctcggctggtaggaatattgctgcccgg
ctgctgagtggctttgatctccggagtcgcctgtgccgctttatagctgaggctccccag
gatctggccttgcccccagaggaagccgagacactgagcactgaggccttccgtctgtgg
gccgtggcagcctcctacggccagggtggtgacctttacagggagctgtaccctgtgctg
acgcgagccctgcaggctgtgccgaaggagctcagcagcccctcccctcagcccctggct
ctgcagagggcagcctcactgctcaccgtcctcacccagctgaccctagcagccggtagc
accgcccctgagcccagaagtgactctgctgaggccagtctgtcatccactccttcctca
atcacttggacgcaggtgtctgggctccagcctcttgtggagccttgtctaagacagacc
ttgaagttgctgcccagacctgagatgtggactgcccttggcccagtgcccactgcctgt
ctgctcttcctggatgcttactaccaggcctggagccagcagccaggcttgtgcccaggg
gattggcttcaggacacggagcgcctgtcggaggagctgctgctgcccctgctgagccag
cccgctctgggcagactgtggcattcgctggggtgctgctcccctctctgcaacccacag
tcctgtgctccggcccctgaagctctccccagcctggtgtcactgggctgcgcaggaggc
caccctcctcttagtctggctggctcagcctcccccttcccattcctcacagccctcctc
tctcttttcaacaccctgggctggatccacaaggggctgtgtggccagctggctgccgta
ttggctgccccaggactgcagaactacttcctccaatgtgtggctcctgtggctgctcca
cacctcacacccttctccgcatgggccctgcgccacgagtaccacctgcagcacctggcg
ctcgccctggcccagagagcggcaacactccagccagtgtcagccaccagtgctgccctc
tatcacggcatggccttggccctgctgagccggctgctgcccggaagcgagcacctcgcc
catgagctactgctgagctgtgtgttccggctggagtttctcccggaaggagcatcaggg
ggtccggaggcagccgacttctctgaccggctgtccttagggagcggcggggaccttggg
tgtgagcgagggactctactagctcaggcctgccaggacctccccagcatccgcagctgc
tacctgacccactgctcactggcccgagccagcctgctagcctctcaagccttgcaccga
ggggagctccagcaagtcccagccctgctgctccctgtggctaaggagcctctgctgccc
actgactggcctttcctgccattgattcaactctaccaccgggcctcagacagcccctcg
gggctccctcctgctgacactgtgggcacagccatgcgggccctgcagtgggtgctagtc
ctggagagctggcgcccccaggccctccgggctgtgcctcctgctgcccgcctggcacgg
ctcatgtgtgtgttcttggtggacagtgaattgttccgggagaccccaatacaacgtctg
gtggcagccctcctggcccggctctgccagcctgaagtcctaccaaacctcaacctggat
tgcccacttcctggcctgacgtctttcccggatctctacgccaacttcctggagcatttt
gaggctgtgtcttttggggaccacctctttggggccctggttctcctccccctgcagcgt
cggttcagcgtcaccttgcgccttgccctctttggggagcacgtaggagccttgcgagct
ctgggcctgcctctgacccagttgcctgtgtctctggagagctacacagcgcctcctgaa
gacaacctggcgctccttcagctctacttccgggctctggttactggtgcgctccaatca
cgctggtgccctgtgctctatgctgtggccgtggctcatgtcaacagcttcatcttctgc
caggacccaaagagctcggatgaggtaaaggctgcccgcaggagcatgttgcagaaaact
tggctgctggcagatgagggtcttcggcagcaccttctccactataagcttcctaattct
gcccttccggagggttttgagctgtatccccagttgccccctctgcgtcagcagtacctc
cagaaactgatctcaggggtgctccaaaatggggtttcagagacctag
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