KEGG   Physeter macrocephalus (sperm whale): 102975970
Entry
102975970         CDS       T06011                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pcad  Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcad04121]
    102975970 (HLTF)
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102975970 (HLTF)
Enzymes [BR:pcad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102975970 (HLTF)
Ubiquitin system [BR:pcad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102975970 (HLTF)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102975970 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-Nse zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 102975970
NCBI-ProteinID: XP_023987609
Ensembl: ENSPCTG00005000090
UniProt: A0A2Y9TH61
LinkDB
Position
1:19661209..19733551
AA seq 1127 aa
MEPPLQPGPPPPVFESLRGAELLTLLCSTWLVSVGPSSGLDVPGASHKASLASHITAGRR
LRRRLARLAASYLAEARSCFGPRNLSQAFRPRGLEGGLSRRLENDPGLLSSSRHPLSAMS
WIQFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLFG
TLRGHVVGLRYYTGVVNNNEMVALQRDPDNPYDKNAIKVNNVNGNQVGHIKKDLAAALAY
IMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFS
LESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTQEMEPAEAIETPLL
PHQKQALAWMVSRENSKELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGLGKT
LTAIAVILTNFHDGKSLPIERIKKNQLKKECNVYDESMKLGGNNTSEKADGLIKGSRCSG
EPSISDVKGKNKYPKSEFSSSRPKRRKTAVQYTESSDSEETETNELPQKLKGKLKNTQSE
TKIREKAGSSKVKEDAEFACALTSSTPATKKKMLKKRASAVESSKKTDIEERPRTTLIIC
PLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILTHDYGTKA
DSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSF
LKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIRGKPVLELPERK
VFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLL
TNAVSPSGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKP
CICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKPNMEWTSSSKINALMHAL
IDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEA
GSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIV
KDSVEENMLKIQNTKRELAAGAFGTKKADASEMKQAKINEIRTLIDL
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggaacctcccctgcagccgggaccccctcctcccgtctttgaatcgctgcgcggggcg
gagttgctcaccctgctgtgctctacttggttggtctccgtaggcccctcctcgggattg
gacgttccgggtgccagtcacaaagcgtcgctggcctctcacattactgctggaaggaga
ctacgtcgacgtctggctcggctcgcggcgtcttaccttgcagaagctcgctcttgcttc
ggccctcggaacctgtcccaggcttttcggccccgaggcctggaaggaggcttatccagg
cggctcgagaacgatcccgggctcctaagttcctctcgtcacccgctcagcgccatgtcc
tggatccagttcaagagagatcctgtttggaagtacttgcagactgtccagtacggagtc
catggaaattttccacgcctctcatatccaactttctttcctcgttttgaattccaagat
attattcctccagatgatttcctaacgagcgatgaagagctagattcagttttatttgga
actttgagaggtcatgtagttggactacgctattacacaggagtagttaataataatgaa
atggttgcattacaacgagatcctgataacccttatgataagaatgcaattaaagtaaac
aatgtgaatggaaatcaggtcggccatataaagaaagatcttgcagctgccttggcctat
atcatggacaacaaattggctcaagttgaaggggtagttccttttggtgcaaacaatgct
tttaccatgcctttgcatatgactttttggggaaaagaagaaaatagaaaagcagtttta
gatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattcagt
ttggaaagtggttggggctctggaagagcgggaccaagctatagtatgccagttcatgct
gcagtacagatgacaactgaacagcttaagacagagtttgacaaattgtttgaagattta
aaggaagatgataaaactcaggaaatggaaccagctgaggctattgaaacaccgttgctt
ccacatcaaaaacaagctctagcttggatggtttcacgggaaaacagtaaagaacttcca
ccattctgggaacagcgaagtgacttatactataacacaataacaaatttttctgaaaag
gaccgaccagaaaatgttcatggaggaattttagctgatgacatgggtttgggcaaaact
ctgacagccattgcagtgattcttaccaacttccatgatggcaaatctcttcctattgaa
agaattaagaaaaatcagctgaagaaggaatgtaatgtttacgatgaatctatgaaactt
ggagggaacaataccagtgaaaaggcagatggactaatcaaaggatctagatgtagtgga
gaacccagtatttcagatgtcaagggaaagaataaatatcccaagtcagaattctctagc
tcccgccccaaaaggagaaaaactgcagtacagtacactgaaagcagcgattcagaggaa
actgaaacaaatgaattgccacagaaattgaaaggcaaactgaaaaatacacagtcagag
actaaaatcagagaaaaagcaggatcatctaaggttaaagaagatgcagagtttgcatgt
gcacttacttcatctacccctgcaaccaaaaagaaaatgttgaaaaagagagcatctgca
gtggagagttcaaagaaaactgatattgaagagagaccaagaacaacactgatcatctgt
ccactttctgtgttaagcaactggattgaccagtttggacaacatataaaatcagatgtg
cacttgaatttttatgtttattatggtcctgatcgtgttagagacccagccttgctttcg
aaacaggatattgttttgactacatataatattttaactcatgactatggaactaaagct
gatagtccgctacatagcataaggtggctaagagtgatcctggatgaaggacatgccata
cgaaatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaaagaagatgg
gtattgacaggcactccaattcagaattctttaaaggacttgtggtctcttctttccttc
ttaaaacttaaaccatttcttgatagagaatggtggcatagaacaatacagcgtcctgtc
acaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatattacactt
agaagaacaaagacaagcaaaattagaggaaaacctgttttggagttaccagaacgtaaa
gtatttattcagcacattacactttcagatgaagagaggaagatttaccagtctgtgaaa
aatgaaggcagagctactattggaaggtattttaatgaagggactgtccttgcacactat
gcggatgtcctgggtcttttgcttagattgcggcagatttgttgtcacactcaccttctc
acaaacgcggtgtctcccagtggtccctcaggaaatgatacacctgaagaactacgaaag
aagttaataaggaagatgaagttaattctgagctcaggttctgatgaagaatgtgcaatt
tgcttggattctttaacggttcctgtcataacacattgtgcacacgtcttctgtaaaccc
tgcatttgccaagtcattcagaatgagcagccacatgctaaatgccctttatgcagaaat
gatatacatggagacaatttattagaatgtcctccagaagaattggcatgtgacacggag
aaaaagcctaatatggaatggacatccagttcgaagattaacgctctaatgcatgcattg
attgatttaagaaagaagaaccccaacataaaaagtttagttgtttctcagtttacaaca
tttctgtctttaatagaaacaccactcagagcctctggatttgtgttcactcgtttggat
ggttctatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacactgaagca
ggatctccaactataatgcttctgtccttaaaagcaggtggagttggtctgaatctttct
gcagcttctcgagtatttttaatggatccagcctggaatccagctgctgaagatcagtgc
tttgacagatgccatagacttggccagaagcaagaagttatcatcacgaaattcattgtg
aaggattctgttgaagaaaatatgctgaaaatacaaaacacaaagagagaacttgcagct
ggagcctttggaactaaaaaagcagatgctagtgaaatgaaacaagctaaaattaatgaa
atcagaactttaattgatttataa

DBGET integrated database retrieval system