Physeter macrocephalus (sperm whale): 102976014
Help
Entry
102976014 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
pcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102976014
09123 Folding, sorting and degradation
03018 RNA degradation
102976014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102976014
03041 Spliceosome [BR:
pcad03041
]
102976014
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102976014
mRNA cycle factors
Stress granule specific factors
102976014
Spliceosome [BR:
pcad03041
]
Complex C
Other components
Complex C specific factors
102976014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_10
RBD_DEAH11
Nup35_RRM_2
RBD_RDR6
DUF2408
AP2
Motif
Other DBs
NCBI-GeneID:
102976014
NCBI-ProteinID:
XP_023987765
UniProt:
A0A2Y9TFX0
LinkDB
All DBs
Position
7:48498854..48500413
Genome browser
AA seq
385 aa
AA seq
DB search
MHVAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLITRCSLGYAYVNFLQ
LADAQKALDTMNFDPIKGKSICLMWSQHDAYLRKYGIGNVFIKNLDRASLNLDKSIDNKT
LYEHFSSFGKILSSKEMSDDHGSRGYAFVHFQNQITADRAIQEMIGALLKDCRLFVGRFK
SRKDREAELQNKASEFTNVYIKLRKKKKKKNFGDDVDDERLREVFSKYGKILSVKVMTDS
SGKSKGFGFGSFDSHEAAKKAAEEINRKDINGQLLFVGRAQKKAERQAELKQMFEQLKQE
RFRRCRGAKLYIKNLDETIDDEKLRREFPSFGSISRVKVMQEEGRSKGFGLICFSSPEKA
TKAMTEMNGRILGSKLLNIALAQRP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtagctgccaagtaccgccaggcctccctgtacgtgggtgacctccacgcggac
gtcaccgaggacctgctgttcaagaagttcagcgctgtggggcccgtgctgtccatccgc
atctgcagggacctgatcacccgctgctctctgggctatgcctatgtgaactttctgcag
ctggcagatgcccagaaggccctggacaccatgaactttgacccgataaagggcaaatcc
atctgtctcatgtggtctcagcatgacgcctacttgaggaaatacggaattgggaacgtg
ttcatcaagaatctggacagggcttccctgaatctggacaaatccattgataacaaaacc
ctttatgaacacttttcatcttttgggaagatcctgtcctccaaggagatgagtgatgat
cacggctccaggggctatgcgttcgtgcactttcagaaccagattaccgccgacagggcc
atccaggagatgattggggcactgcttaaggactgtaggctgtttgttggcagattcaaa
agccgcaaagatcgggaagctgagctccaaaacaaagccagtgagttcaccaatgtttac
atcaaacttcgaaaaaaaaaaaaaaaaaaaaacttcggagatgatgtggatgatgagaga
ctgagggaagttttcagcaaatatggaaaaatcctgagtgttaaggtgatgacagattcc
agtgggaaatccaaaggctttggctttgggagttttgatagccatgaggctgccaaaaag
gctgctgaagaaatcaatagaaaggacataaatggacaactgctttttgtaggccgggca
caaaagaaagcagagcgacaggctgagttaaagcaaatgtttgagcagctgaaacaggaa
agatttcggcggtgccggggggcaaagctctatattaagaacctggatgagaccattgat
gatgaaaagctacggagggaatttccttcatttggatcaattagcagagttaaggtaatg
caggaagaagggcgaagcaaagggtttggcctgatctgcttctcctctcctgagaaggcc
actaaagcaatgactgagatgaatggccgcatcttgggctccaagctgctcaacatcgcc
ctggcccagaggccgtag
DBGET
integrated database retrieval system
