Physeter catodon (sperm whale): 102976096
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Entry
102976096 CDS
T06011
Symbol
TBP
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad05016
Huntington disease
pcad05017
Spinocerebellar ataxia
pcad05165
Human papillomavirus infection
pcad05166
Human T-cell leukemia virus 1 infection
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102976096 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102976096 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102976096 (TBP)
05165 Human papillomavirus infection
102976096 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
102976096 (TBP)
05017 Spinocerebellar ataxia
102976096 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102976096 (TBP)
03021 Transcription machinery [BR:
pcad03021
]
102976096 (TBP)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
102976096 (TBP)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102976096 (TBP)
RNA polymerase III system
TFIIIB
102976096 (TBP)
RNA polymerase I system
SL1/TIF-1B
102976096 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
DDHD
Presenilin
PAT1
CNDH2_M
Motif
Other DBs
NCBI-GeneID:
102976096
NCBI-ProteinID:
XP_023978474
Ensembl:
ENSPCTG00005000605
UniProt:
A0A2Y9SRW0
LinkDB
All DBs
Position
10:complement(553720..569816)
Genome browser
AA seq
328 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQGTNSLSVLEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQQQVAAAAVQQPTPQQAAQGAPGQTPQLFHSQTLTTAPLPG
ATPLYPSPMTPMTPITPATPASESSGIVPQLQXLQNIVSTVNLGCKLDLKTIALRARNAE
YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFL
DFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVV
LTGAKVRAEIYEAFENIYPILKGFRKTT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctcccaccttatgcccagggcctggcctcccctcagggcgcc
atgactcctggaatccctatctttagtccgatgatgccgtacggcacgggactgacccca
cagcccgttcagggcaccaacagcctgtctgttttggaggagcagcaaaggcagcagcag
cagcagcagcagcaacaacaacagcagcaacaacagcagcagcagcagcagcagcagcag
cagcaggtggcagcggcggccgtgcagcagccgacgccccagcaggcagcccagggggcg
cccggccagacaccacagcttttccactcgcagactcttacgaccgcgcccttgccgggc
gccacgcccctgtacccctcccccatgacccccatgacccccattacccctgccacgcca
gcctcggagagctccgggattgtgccgcagctgcagtgactgcaaaatattgtatccaca
gtgaatcttggttgtaaacttgacctaaagaccattgcacttcgtgcccggaatgctgaa
tataatcccaagcggtttgctgctgtaatcatgagaataagagagccccggaccactgca
ctgatattcagttctgggaagatggtgtgcacaggagccaagagtgaagaacagtccaga
ctagcagcaagaaaatacgccagggttgtacagaagttgggttttccagctaagttcttg
gacttcaagattcagaacatggtggggagctgcgacgtgaagttccctataaggttagaa
ggccttgtgcttacccaccaacagttcagtagttatgagccagagttatttcctggttta
atctacagaatgatcaaaccgagaattgttctccttatttttgtttctggaaaagttgta
ttaacaggtgctaaagtcagagcagaaatttatgaagcctttgagaacatctaccctatt
ctaaagggtttcaggaagacaacgtaa
DBGET
integrated database retrieval system
