Physeter macrocephalus (sperm whale): 102976101
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Entry
102976101 CDS
T06011
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
pcad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102976101
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102976101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102976101
03041 Spliceosome [BR:
pcad03041
]
102976101
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102976101
mRNA cycle factors
Common to processing body (P body) and stress granule
102976101
Spliceosome [BR:
pcad03041
]
Common components
Common spliceosomal components
hnRNP proteins
102976101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102976101
NCBI-ProteinID:
XP_028334599
UniProt:
A0A455AGH3
LinkDB
All DBs
Position
18:5472951..5474575
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AA seq
348 aa
AA seq
DB search
MPTTFSLSACGRRRVSIVDVSPHPSTAVVSKSESPKEPEQLRKLFIGGLSFQTTDESLRS
HSEQWGTLTGCVRMRDPNTKHSRGFGFVTYATVEQVDAAMNARPRKVDGRVVEPKRAVSR
EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYCEQYGKTEVIEIVIDRGSGKKRGFAFIT
LDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGQSGSGNFGGGRGGGFGG
NGNFGRGGNFSGRGAFGGSHGGGGYGGSGNGYNGFGNDGSDFGGRGSYNDFGSYNNQSSN
FGPMKGGNFGGKSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcctactacgttcagcctttctgcttgtggacgccgccgagtaagcattgttgacgtc
tccccccacccctccactgccgtcgtgtctaagtcagagtcacccaaagagcccgaacag
ctgcggaagctcttcatcggaggtttgagctttcaaacaaccgatgagagtctgaggagc
cattctgagcagtggggaacgctcacaggctgtgtgagaatgagggatccaaacaccaag
cactccagaggcttcgggtttgtcacgtatgccactgtggagcaggtggatgcggccatg
aatgcaaggccacgcaaggtggatggaagagttgtggaaccaaagagggccgtctcaaga
gaagattctcaaagacctggtgcccacttaactgtgaaaaagatttttgttggtggcatt
aaagaagacactgaagaacatcacctaagagattattgtgaacagtatgggaaaactgaa
gtgattgaaatcgtgattgatcgaggcagtggcaaaaagagaggctttgctttcataacc
ttggatgaccatgactctgtagacaagattgtcattcagaaataccacacggtgaatggc
cacaactgtgaagtaaggaaagccctatctaagcaagagatggctagtgcctcatccagc
caaagaggtcaaagtggttctggaaactttggtggtggtcgtggaggtggttttggtggg
aatggaaactttggtcgcggaggaaacttcagtggccgaggtgcctttggtggcagccac
ggtggcggtggctatggtggcagtggaaatggctataatggatttggtaatgatggaagc
gattttggaggtcgtggaagctacaatgattttggcagttacaacaatcaatcttcaaat
tttggacccatgaaaggaggaaactttggaggcaaaagttctggcccctatggtggtgga
ggccaatactttgccaaaccccgaaaccaaggtggctatggtggttccagcagcagcagt
agctatggcagtggcagaaggttttga
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