Physeter macrocephalus (sperm whale): 102976275
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Entry
102976275 CDS
T06011
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102976275 (NRDE2)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102976275 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
102976275
NCBI-ProteinID:
XP_007102742
Ensembl:
ENSPCTG00005012097
UniProt:
A0A2Y9EJ76
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All DBs
Position
11:complement(169286983..169335428)
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AA seq
1165 aa
AA seq
DB search
MALFPAFAGVSEAPESGSPRKELDWLSNPSFCVGTITSLSQQTEEATAFASEESLLTRSP
LKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHQHHKKTKSKRGQSSSSGSESYTDSEKDR
SCGNIRGSKKESEKPNQENNATADIGRHFVWLEDIQALTGETFRTDKKPDPANWEYKSLY
RGDVARYKRKGDSCLGINPKKQCISWEGTSTEKKRSHKHVERYFTKKSVGLMSINGVAIS
SKTEPPSSESISFIPVKGAEDVVSPVTSWLNPLGIYDEATTQWLQGRGPSEQESKQPGSQ
PDRENVLLKAKVEEFNRRVWENPRDIQLWMAFVAFQDEVMRSPGLYAIEEGEQEKQKRSL
RLVLEKKLAILERAVESNPSSVDLKLAKLQLCAEFWEPSTLVKEWQKLIFLHPNNTALWQ
KYLLFCQSQFSTFSISKIQSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFALFLQQCHF
LRQAGHSEKAVSLFQALVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAGEKGARGWR
AWMQQQERGGWVVVSPDDDDDEPEDEDQEIKDKTLPRWQIWLAAERSRDHRHWRPWRPEK
TKKQAEEDCEDPERQVLFDDIGQSLIRLSSPDLQFRLIAAFLQFLGVPSGFSPPASCLYL
AMDENSIFDNGLYDEKPLTFLSLSFSGVSCVGRTDQLGCRHWTRGHSREGEEFIRSIFHL
VMPLFSGKERSQLCFSWLRYEIAKVVWCLHTKNKKRLKSQGKNCKKLAKNLLKEPDNRNN
FGLWKQYAHLEWLLGNTEDARRVFDTALSIAGSRELKDHELCELGLLYAELEVELLPDVR
GAASARAIHVLTRLTENGAYGPYTGQVLAVHILKARKAYEHALQDCLGESCVSDPAPADS
FSRLISLVKCFMLFQYLTIGIDAAVRIYEQVFAKHKISVSAEGPGLEGSASPQNLSGVLE
AVTLMHTSLLRFHMKVAVYPLAPLREALSEALKLYPGNQVLWRSYVQIQNKSHSASKTRR
FFDAITRSAKPLEPWLFAIEAEKMRKRLVETVQRVDGREVYATIPETGLTHRIRALFENA
MRSDYGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEYFPDEMQE
ILDLMTEKELRVRLPLEELELLLED
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttccccgcctttgcgggtgttagtgaggcgcccgagagcgggagccccagg
aaagaattagactggctgagcaacccaagcttttgtgttggaaccataacatctctgagc
caacaaactgaagaggccacagcctttgcttctgaagagtcgctactgaccaggagtcct
ctgaagtcagagccttcagatgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcagcaccacaagaaaaccaagagt
aaacgtgggcagtccagtagcagtggatctgagtcatatactgattctgaaaaggacaga
tcttgcggaaacatcagaggcagtaaaaaggaatcagagaaaccgaatcaagaaaataat
gccactgctgatattggacgtcactttgtttggcttgaggacattcaggctctgacggga
gaaaccttcagaacagataagaagccggatcctgcaaactgggagtataagtctctttac
cgaggagatgtagcaagatacaagaggaaaggagactcctgccttggcattaaccctaag
aagcagtgtatatcttgggaggggacttccacagaaaagaagcggtcacacaagcatgtc
gagcgctactttacaaagaagagtgtgggattaatgagcattaacggagttgccattagc
agtaaaactgaacctccctcatcggagtcgatctcatttatcccagtgaagggtgcagag
gatgtggtttcccctgttacaagctggttgaaccctctggggatttatgatgaagccacc
acgcagtggttacaaggccggggtccttcagagcaggaatccaagcagcccggttcacag
cccgacagagagaacgtgcttctcaaggccaaggtggaggagtttaacaggagggtttgg
gagaatcctcgagatattcagctgtggatggcatttgttgcttttcaggacgaggtcatg
agaagtccgggcctgtacgccatcgaggaaggagagcaggaaaagcagaagcggtccctg
aggctggttctggagaagaagctggccattctggaacgggccgtggaaagcaacccgagc
agcgtggatctgaaacttgccaagctgcagctctgcgccgagttctgggagccctccact
ctggtcaaagagtggcagaaactgatatttttacatcccaacaatacagccctttggcag
aaataccttttattttgccagagccagtttagcaccttttccatatcaaaaattcagagt
ctttatggaaaatgcttgagtactttgtctgctgttaaggacggcagcatcttgtctcac
cctgagctgcctggcactgaggaggccatgtttgccctctttcttcagcagtgccacttt
ctgcggcaggctggtcactccgagaaggccgtctctctgttccaggccctggttgacttc
accttcttcaaacccgacagtgtgaaagacctgcctaccaaaggacaggtcgaattcttt
gagcccttttgggacagtggagagcccagggccggggagaagggcgcccgaggctggaga
gcgtggatgcagcagcaggagcggggcggctgggtggtcgtcagcccagatgatgacgat
gatgaaccagaagacgaggaccaggaaattaaagataagactctgcccaggtggcagatc
tggcttgctgctgagcggtcccgagaccacagacactggcggccgtggcgccctgagaag
accaagaagcaggcggaggaagactgtgaggacccagagaggcaggtgttgtttgatgat
attggacagtctctgatccgactttccagcccggatcttcagtttcggctgattgcagcc
tttctgcagttcttgggtgtgccttccggcttcagccctccggcctcctgcctctatctg
gccatggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgactttt
ctcagcctttcattttccggcgtcagctgtgtcggacgcacggaccagctgggttgccgg
cactggaccaggggtcacagtcgagagggcgaggagttcatccgcagcatcttccacctc
gtgatgcctttgttttcaggcaaggagaggtctcagctctgcttctcctggttacggtac
gagattgcaaaggtcgtttggtgtctgcacactaaaaacaagaagagattaaaatcacaa
ggaaagaactgcaaaaaactagccaagaatctccttaaggagccagacaaccgcaacaac
tttggcctctggaagcagtatgcacatctggagtggctgctcggcaacacagaggacgcc
agaagagttttcgatacagcgctcagcatagcagggagcagagaactgaaggaccatgag
ctgtgtgagctcggtctcctctacgccgagctggaggtggagctgttgccggacgtgaga
ggggccgcctcagcccgagccattcatgtattgaccagactgaccgagaacggggcctac
gggccctacaccgggcaagtcttggccgttcacattttgaaagctcggaaggcttatgaa
cacgcgctgcaggactgtttgggggagagctgtgtctccgatccagctcccgccgattcc
tttagccgcctgattagcctggttaaatgctttatgctcttccagtatttgaccataggg
atcgacgctgctgtgcggatatatgagcaggtatttgcgaaacacaagatctctgtttcc
gcagagggccctggcctggagggcagtgccagcccccagaacctgagcggtgtcctcgag
gccgtcaccctgatgcacacgagcctgctcagattccacatgaaagtcgccgtctaccct
ctggcgcctctgcgagaggctctctcggaggctttaaagttgtatccgggcaaccaggtt
ctttggaggtcgtatgtacagattcagaataagtcccacagtgccagtaagaccagaaga
ttcttcgatgcgatcaccaggtctgccaaacccttggagccgtggttgtttgcaattgaa
gctgagaaaatgaggaaaagactagtggaaacggtgcagagggtagatggtagagaggtc
tacgccaccattcctgagaccggcctgacgcatcggatcagagccctatttgaaaatgcg
atgcggagtgactacggcagccagtgccccttactgtggaggatgtacttgaattttttg
gtttccttaggaaataaagaaagaagcaaaggtgtgttctacaaagcacttcagaattgt
ccttgggcaaaggtgctgtacctggatgccgtggagtacttccccgatgagatgcaggag
atcctggacctgatgacggagaaggagctccgggtgcgcctgccgctggaggagctggag
cttctgctcgaggactag
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