Physeter macrocephalus (sperm whale): 102976456
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Entry
102976456 CDS
T06011
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102976456 (TOPORS)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102976456 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcad03037
]
102976456 (TOPORS)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102976456 (TOPORS)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102976456 (TOPORS)
UBL E3 ligases
102976456 (TOPORS)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102976456 (TOPORS)
Cilium and associated proteins [BR:
pcad03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102976456 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102976456
NCBI-ProteinID:
XP_007116531
Ensembl:
ENSPCTG00005001378
UniProt:
A0A2Y9F7A3
LinkDB
All DBs
Position
9:complement(73202601..73213611)
Genome browser
AA seq
1044 aa
AA seq
DB search
MGSQQPPGSPLSREEGEAPLPTPAPEGRRRSRRVRLRGSCRHRPSFLGRRELATSSPAGP
APVSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDVRRFR
YRTTMTRERSASIYSPNSTMNRRTTTPPDSGVIFEGLGISARPRDGEIPPFMRQIAIRRP
ATADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDVNVATISQAPWDDE
TPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTGRATSQMQGVQTNDDINNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKAQEQEQSYSSGDSDVSRCSSPHSVL
GKDEQINKGHCDSGTRITSKKEEKRSVSLSSPRDLSSSIRGDRVYSPYTRRHRRRGRSRS
SDSCSQSRSGHDQKNRRKHHGKKRMKSRRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQT
LSLSSESTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSTRSKT
ASTGPDRVRNEKPGGKRKYKTRHLEGSNDVAQPSREFASKVKEGHYSKSSSKLDGSYKNE
SDSFSDSRSSDRETKHKRRKRTRSLSVEIVYEGKATDTTRHHKKKKKKHKRKHKKHHGDD
ASRSPVVITIDSDSDKDSEVKEDTECDLSGSQNPLQNEFLVPSLGPFETKDVVTIEDEFG
VLGKECDITTLNNNLNNANKTVDNISPQAASIEQTLDVREESTFASDLESQPSNVSYHTE
SSRRLPSPRISLMSVSLGRDHDMS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggtgaagcgcccctg
cctactcccgctcctgagggccggcggagaagtcgccgggttcgccttcgcgggtcctgc
cgtcaccgacccagctttctgggccgtagggagcttgccacgagctccccagccgggcct
gcgccggtatcctccgagataatggcatcagccgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggataggtttgataatgtgtcttacttagatcgctgttta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagacgacttcaaggag
tatgtcctaaggccttcatacaatggttcttttgctacccctgatgttcgacgattccgc
taccgtacaactatgacaagggaacgaagtgcttctatttattcacctaatagtaccatg
aatagaagaacaacaactccaccagatagtggagtaatatttgaagggttaggcatttca
gcaagacctagagatggtgaaattcctccatttatgagacagattgcaataaggaggcca
gctactgcagatgaaagatctttgcggaaaattcaagaacaggatattattaattttagg
cgaactctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctatagg
gatatttcagctgaatttttccgtagaaatccggcttgccttcacagattagttccctgg
ttaaaacgtgaactcacagttctctttggagctcatggatcattagtgaatattgtccag
catatcatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgat
ttaaggccatttttactaaatcggactgagcattttatacacgaatttatcagttttgcc
cgatctccatttaacatggcagcctttgaccagcatgcaaattatgattgtcctgctcct
tcatatgaagaaggtagccattctgattcttcggtcataacaatatctcccgatgaagca
gagacccaagagctggatgttaatgtagctactattagtcaggcaccatgggatgatgaa
actccagggccatcttattcaagctcagagcaggtacatgctgccatgtcttccctttta
aatacttccgacagttcagatgaagaacttgtaacaggaagagccacatctcagatgcaa
ggagtacaaaccaatgacgacataaataatgacagtgattcttcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggttcctacgaaaaaatggagactgtgaaggcacaagaacaagag
cagtcttacagttctggtgatagtgatgttagtagatgttcatctccacactctgtcctt
ggaaaggatgaacaaataaataaaggtcattgtgattctggtacaagaatcacatcaaag
aaggaagagaaacggtctgtatcattgtcttctcccagagacctgagctcatccatcaga
ggagacagagtatattccccatatacccgcagacacagaaggaggggaagatccagaagt
tcagattcatgttcccagagtaggagtgggcatgatcagaagaatcgtaggaagcatcat
gggaagaaaagaatgaaaagcagacgatccagaagcagggagagtagcagacctagaggt
agaagagacaaaaagagatcaagaactagagatagcagttggtcaagaagaagccaaact
ctatctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgatcgtggtaaa
agaagatcacggagcagaaatcgagatcgttactatttaagaaataattatggaagcaga
tataagtgggagtatacttactatagtagaaacaaggacagggatggctacgaatcatct
tacaggaggaggactctgtccagagctcattattccagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgctaggaaaaaaaataatcacagtgaaagg
aaatattactactatgaaaggcatagatcgaggagcctatctagtactagatcaaagact
gcatctacagggcctgaccgtgtgagaaatgaaaagcctggcgggaaacgaaaatacaaa
acacggcatttggagggttctaacgatgtggctcaaccatctcgggaatttgcttctaaa
gtaaaggaaggtcattactcaaaatcttcatcaaaattggatggaagctacaaaaatgag
agtgacagcttttcagatagccgatcatcagacagagagacaaagcacaagagaagaaaa
aggacccggagcctaagtgtagagatagtttatgaagggaaagctaccgatacaactaga
caccataaaaagaaaaagaaaaaacataagaggaagcataagaaacaccatggcgatgat
gcctcacgttccccagttgtgattaccattgacagtgacagtgataaggattctgaagta
aaggaggatacagaatgtgaccttagtggttctcaaaaccctctacaaaatgaatttttg
gttccttccttgggaccatttgaaactaaagatgtagttacaatagaagatgaatttggt
gtcctgggcaaggagtgtgatattaccacacttaataacaacttgaataatgccaacaaa
actgtagataatatttcaccccaggcagcttcaattgaacagactcttgatgtaagagaa
gagagcacctttgcctctgatttggagagccagcccagtaatgtctcttatcacactgag
tcatcaaggcgattgccatctccacggatatcgttaatgtcagtgtctcttggtagagac
catgatatgtcttaa
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integrated database retrieval system
