Physeter macrocephalus (sperm whale): 102976556
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Entry
102976556 CDS
T06011
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102976556 (DDX18)
03009 Ribosome biogenesis [BR:
pcad03009
]
102976556 (DDX18)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102976556 (DDX18)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102976556 (DDX18)
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
90S particles
Helicases
102976556 (DDX18)
Pre-60S particles
102976556 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
102976556
NCBI-ProteinID:
XP_023970783
Ensembl:
ENSPCTG00005000893
UniProt:
A0A2Y9RWU0
LinkDB
All DBs
Position
2:28507780..28524580
Genome browser
AA seq
700 aa
AA seq
DB search
MFHLPMKLLRKKIEKRNLRLRQRNLKLQGASAVNLSETQNGDVSEGTVGGGKIKKPLKQS
VNVGLSETQNGDISEEVVVGGKVKKFLKQSMNAGWSEAQNGDLPKETVENVKVKKSSKKS
TTLTSGEAAMQSPNAESKKKKKKKKRKIVDDAGPDSKKAKTEDQGDSEDGAQAPEETENS
VEKPDNEDDDSMVPSLPLGLTGAFEDTSFDSLTNLVNENTLKAIKEMGFTNMTEIQHKSI
RPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGV
LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINVIVATPGRLLDHMQNTPGFMYKNLQCL
VIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDD
DKAHATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDL
PVLAIHGRQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYI
HRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIE
KNYFLHKSAQEAYKSYIRAYDSHSLKQIYNVNNLNLPQVALSFGFKVPPFVDLNVNSNDG
KLRKRGGGGGFGYQKARKVEKSKIFKHISKKPSDGRQFSH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatctaccgatgaaacttttacgcaagaagatcgagaagcggaacctcagattg
cgacagcgaaacctaaagctccagggggcctcagctgtgaacttgtcagaaactcaaaat
ggagatgtgtctgaaggaacagtgggaggtggaaaaattaaaaagcccctaaaacagtct
gtgaatgtgggcttgtcagaaacccaaaatggagacatctctgaagaagtagtagtaggt
ggaaaagttaaaaaattcctaaaacagtctatgaatgcaggctggtcagaagcccaaaat
ggagacttacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagaaatct
accacactgaccagtggggaagcagcaatgcagtctcccaatgcagaatcaaaaaagaag
aagaagaagaaaaagagaaaaatagtggatgatgctgggcctgattccaaaaaagcgaaa
actgaagaccaaggagactctgaagatggtgcccaggctcctgaagaaacagaaaacagt
gtggagaagccagacaatgaggacgatgacagcatggtgcccagcctgcccctgggactg
acaggagcttttgaggatacttcgtttgattctctgactaatcttgtcaatgagaacact
ctgaaggcaataaaagaaatgggctttacaaacatgactgaaattcagcataaaagtatc
agaccacttctggagggcagggatcttctagcagctgcaaaaacaggcagtggcaaaacc
ctggcatttctcattcctgcagttgaactcattgttaagttaaagttcatgcccaggaat
ggaacaggagtccttattctctcacctactagggaactagccatgcagacttttggcgtc
cttaaggagctgatgacacaccatgttcacacatatgggttaataatgggtggcagtaac
aggtctgctgaagcacagaagcttgccaatgggatcaacgtcattgtggccacaccaggc
cgcctcctggaccatatgcagaataccccagggtttatgtataaaaacctacagtgtctg
gttattgatgaggctgatcgtatcttggatgttgggtttgaagaagaattaaagcaaatt
attaaacttctgccaacccgcagacagaccatgctcttttctgccacacaaactcgaaaa
gttgaagacctggcaaggatttctctgaaaaaggagcccttgtatgttggtgttgatgac
gataaagctcatgcaaccgtggacggtcttgagcagggatatgttgtctgtccttccgaa
aagagattcctcctactctttacattccttaagaagaaccggaagaagaaactgatggtt
ttcttttcatcctgtaagtccgtgaaataccactatgagttgctgaactacatcgatttg
cctgtcttggccattcatggaaggcagaaacaaaataagcgtacgaccacgttcttccag
ttctgcaatgcagattcggggatcttgttgtgtacagacgtggcagctagagggctggat
attcctgaagtggactggattgttcagtatgaccctccggatgaccccaaggaatatatt
catcgtgtgggtagaacagccagaggcctgaacggcagagggcatgccttgctcattttg
cgccctgaagaattgggtttccttcgctacttgaagcagtccaaggttccgttaagtgaa
tttgagttttcctggtccaaaatttctgacattcagtctcagcttgaaaagctgattgaa
aagaactacttccttcataaatcagcccaggaagcgtataagtcatacattcgagcgtat
gattcccattcgctgaaacagatctataatgttaataacttaaacttgcctcaggttgct
ctgtcatttggtttcaaggtgcctccttttgttgatttgaacgtgaacagcaacgacggc
aaacttagaaaaaggggcggcggcggtggcttcggctaccagaaagccagaaaagtcgag
aagtccaagatcttcaagcacataagcaagaaaccatctgacggcaggcagttctctcac
tga
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