Physeter macrocephalus (sperm whale): 102976617
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Entry
102976617 CDS
T06011
Symbol
SFTPD
Name
(RefSeq) pulmonary surfactant-associated protein D
KO
K10068
pulmonary surfactant-associated protein D
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102976617 (SFTPD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102976617 (SFTPD)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pcad04091
]
102976617 (SFTPD)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Phagocytosis
Opsonins
102976617 (SFTPD)
Lectins [BR:
pcad04091
]
C-Type lectins
Collectins
102976617 (SFTPD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
102976617
NCBI-ProteinID:
XP_007111555
Ensembl:
ENSPCTG00005006186
UniProt:
A0A2Y9EZJ1
LinkDB
All DBs
Position
20:30006409..30022978
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AA seq
388 aa
AA seq
DB search
MPEPGHPSEPEKDMLLLPLSMLTLLSQPPGSLGAEMKTYSQKTLANACTLVMCSPPENGL
PGRDGQDGREGPRGEKGNPGLPGPVGGAGMPGPAGPVGPKGDNGSAGEPGPKGDTGPSGP
PGPPGMPGPAGRDGASGRQGSIGPAGVPGPKGETGPNGEVGATGMQGSPGTRGPVGLKGE
RGARGERGAPGSAGAARPSGAMGPQGPAGARGLPGLKGDRGDPGERGVKGESGLRDITVL
RQRVETLQGQLQRLQNAFSQYKKVELFPSGQGVGEKIFKTGGFEKTFQDAQQVCTQAGGQ
MASPRSAAENEALRHLVTDQNKAAFLSMTDDKKEGKFTYPTGEPLVYSNWAPGEPNNDRG
AENCVEIYPNGKWNDMACEEQRLVICEF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccgggacatccatctgagccagagaaggacatgcttctcctccctctctcc
atgctgaccctgctctcacagcccccagggtctctgggggcagaaatgaagacctattcc
cagaaaacactggccaacgcctgcacccttgtcatgtgtagccccccggagaatggcctg
cctggtcgtgatggacaagatgggagagaaggcccccggggcgagaaggggaatccaggt
ttaccaggacctgtaggaggagcagggatgcctggaccagctggcccagttgggcccaaa
ggggacaatggctctgctggagaaccggggccaaagggagacactggaccatctgggcct
ccaggacctccaggtatgcctggtccagctggaagagacggtgcctcagggaggcagggg
agcataggacctgcaggtgtaccaggccccaaaggtgagactggacccaatggagaagtg
ggtgccacaggcatgcagggctccccagggacaagaggccccgtaggtcttaaaggagag
agaggtgcccgcggtgaacgcggagcccctggaagtgctggggcagcaaggccttctgga
gccatgggtccacagggacctgcaggtgccaggggcctcccaggactgaagggggacaga
ggtgatcctggagaaagaggagtgaagggagagagtggactccgagacatcactgttctc
cggcagcgggtggagaccttacagggacagctacaacgcctccagaatgctttctctcag
tataagaaagtggagctcttccccagtggccagggtgtcggggagaagatcttcaagaca
ggaggttttgaaaaaacttttcaggatgcacagcaggtatgcacacaggccgggggacag
atggcctccccacgctctgcagccgagaacgaggccttgagacacctggtcacagaccag
aacaaggctgctttcctgagcatgaccgacgacaagaaggaaggcaagttcacctatccc
acaggggagcccctggtgtattctaactgggcccccggggaacccaacaacgacagaggc
gcagagaactgtgtggagatctatcccaatggcaagtggaacgacatggcctgtgaagaa
cagcgcctcgtgatctgcgagttctga
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