Physeter macrocephalus (sperm whale): 102976934
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Entry
102976934 CDS
T06011
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X2
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102976934 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102976934 (VTI1A)
Membrane trafficking [BR:
pcad04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
102976934 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
DUF6987
FliG_N
Fusion_gly
DUF1664
Sec8_N
MMPL
DUF5339
FapA
Peptidase_S46
HAAS
Motif
Other DBs
NCBI-GeneID:
102976934
NCBI-ProteinID:
XP_023977145
Ensembl:
ENSPCTG00005016399
UniProt:
A0A2Y9SLB9
LinkDB
All DBs
Position
20:67054814..67429812
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AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQVVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRVLTGMLRRIIQNRILIVILAVVLVITILTAITFSVRRH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacttcgaaggctacgagcaggacttcgctgtgctcactgcagagatcacc
aataagattgcaagggtcccccgactcccgcctgatgagaagaagcaggtggttgcaaat
gtggagaaacagctcgaagaagcaaaagaactgttggaacagatggatttggaagtccga
gagataccaccccaaagtcgaggaatgtacagcaacaggatgagaagctacaagcaagaa
atgggaaaacttgaggcagattttaaaaggtcacggattgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctgggtaccaaatagcagtggaaaccgaacaaattggccaggagatgttggaaaacctc
agtcatgacagagaaaagatacagagagcacgtgaaagacttcgggaaacagatgctaac
ttggggaaaagctccagggttctgacagggatgttgagaagaatcatccagaaccgcatc
ctgatcgtcattctggccgtcgtcctggttatcaccatcctgacagcgatcactttttct
gtcagaagacactga
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