Physeter catodon (sperm whale): 102977204
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Entry
102977204 CDS
T06011
Name
(RefSeq) nuclear RNA export factor 2
KO
K14284
nuclear RNA export factor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03008
Ribosome biogenesis in eukaryotes
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05164
Influenza A
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102977204
03015 mRNA surveillance pathway
102977204
03008 Ribosome biogenesis in eukaryotes
102977204
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102977204
05168 Herpes simplex virus 1 infection
102977204
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102977204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977204
03009 Ribosome biogenesis [BR:
pcad03009
]
102977204
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102977204
mRNA cycle factors
Stress granule specific factors
102977204
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102977204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
102977204
NCBI-ProteinID:
XP_028338126
UniProt:
A0A455B219
LinkDB
All DBs
Position
21:complement(77627974..77639420)
Genome browser
AA seq
530 aa
AA seq
DB search
MHMTVWRNRKPLEREMGEDTQDGTPGSWFSVTIPSGIKYDRTWLMNSIQSHCSVPFTPVD
FHFVKKGARFFVQEASTASALMNVSYKICDEERRKIPVFVSPSAVPYSVRDKLKPEEMEQ
LKLTLIKRFDVSKQALDLQRLCVDPDLVGHDIDIILNRRSCMAATLQTIRKNFPELLSLN
LSSNSLYQLDGLSDIIQMATRVKVLNLSKNKLKSVWELSKIQGLKLEELWLQGNPLCDTF
PDQSTYVRAIRDRFPKLLCLDGQVLPSAVTTDVDTPCVVKPCKGNYFGSDELKSLVLQFL
QQYYLTHDCGDQQGLMGAYHEEACFSLTIPFHPEDPDPSSLCEYFKDSRNMKKLKDPYLR
VQLLKHTKHDIVHTLCVLPKTQHDFSSFVVDTWFQTETMLCFSVNGLFKEVEGSSQGCVR
AFTRTFITTPASSSSLFIMNDELFVWDVSPKKTQSTFCIPVPTPSTSSMPSFYWEQQQMV
QAFSTQSGMNLQWSQKYLQDNEWNYTRAGQVFSMLKTEGKIPEEAFKEIP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgactgtgtggagaaacagaaaacctctggagagagaaatgggggaggacaca
caagatggaaccccagggagctggttcagtgtcacaattccttctgggataaagtatgac
aggacatggctaatgaactcaatccagagccattgcagtgtccccttcactccagtggac
ttccactttgtgaaaaaaggggctcggttctttgtccaggaagctagcactgcctctgca
ttgatgaatgtcagctacaagatttgtgacgaggagagacgaaagatacctgtctttgtc
agcccctctgctgttccctactctgtgcgggataagttgaagccagaagaaatggagcag
ctaaagctgaccttgatcaaacgatttgatgtctccaagcaagctcttgacctccagagg
ctctgcgttgacccagacttggtgggacatgatattgatataattctgaatcgaagaagc
tgcatggccgccaccctgcaaaccatcagaaagaatttccctgagctgttgtccttgaac
ttgagcagcaacagtctgtaccagctggatggcctgtctgacattatacagatggccacc
agggtcaaggtcctgaacctctccaaaaataagctgaagtctgtgtgggagttgagcaag
atacaagggctgaagcttgaagagctgtggctgcaagggaacccactgtgtgacaccttc
ccagaccagtccacctatgtaagggccatcagagatcgtttcccgaagttattatgccta
gatggccaggtgttaccatcagcagttaccactgacgttgacactccctgcgtagtaaag
ccctgcaagggaaactactttggatctgatgagctgaagagcctagtcctgcaattcctg
cagcagtactacttgacccatgactgtggagaccaacagggtctcatgggtgcttatcac
gaggaggcctgcttctccctgaccattcccttccatcctgaggacccagacccgagtagc
ttgtgcgagtacttcaaggacagcaggaatatgaagaagctgaaggacccttacctgcgg
gtccagctactgaagcacacaaaacatgacattgtgcacaccctctgtgtgttgcccaag
actcagcatgacttcagctccttcgtggtggacacgtggttccagacggaaacgatgctc
tgcttctctgtcaatgggttgttcaaggaagtggaaggaagttctcagggctgtgtgcgt
gccttcacccggaccttcatcactacccctgccagctcttccagtcttttcatcatgaat
gacgagctgtttgtatgggatgtcagccctaaaaagacccagagcacattctgcatccca
gtacccacaccctccaccagctccatgcccagtttctactgggagcagcagcaaatggta
caagctttctccactcagtctgggatgaacctccagtggtctcagaagtatcttcaggac
aacgaatggaactacaccagagctggtcaggtcttcagtatgctcaagaccgagggcaag
atcccagaggaggccttcaaagaaatcccctaa
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