KEGG   Physeter catodon (sperm whale): 102977204
Entry
102977204         CDS       T06011                                 
Name
(RefSeq) nuclear RNA export factor 2
  KO
K14284  nuclear RNA export factor
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03008  Ribosome biogenesis in eukaryotes
pcad03013  Nucleocytoplasmic transport
pcad03015  mRNA surveillance pathway
pcad05014  Amyotrophic lateral sclerosis
pcad05164  Influenza A
pcad05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102977204
   03015 mRNA surveillance pathway
    102977204
   03008 Ribosome biogenesis in eukaryotes
    102977204
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102977204
   05168 Herpes simplex virus 1 infection
    102977204
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102977204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102977204
   03009 Ribosome biogenesis [BR:pcad03009]
    102977204
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102977204
   mRNA cycle factors
    Stress granule specific factors
     102977204
Ribosome biogenesis [BR:pcad03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102977204
SSDB
Motif
Pfam: NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 UBA_8
Other DBs
NCBI-GeneID: 102977204
NCBI-ProteinID: XP_028338126
UniProt: A0A455B219
LinkDB
Position
21:complement(77627974..77639420)
AA seq 530 aa
MHMTVWRNRKPLEREMGEDTQDGTPGSWFSVTIPSGIKYDRTWLMNSIQSHCSVPFTPVD
FHFVKKGARFFVQEASTASALMNVSYKICDEERRKIPVFVSPSAVPYSVRDKLKPEEMEQ
LKLTLIKRFDVSKQALDLQRLCVDPDLVGHDIDIILNRRSCMAATLQTIRKNFPELLSLN
LSSNSLYQLDGLSDIIQMATRVKVLNLSKNKLKSVWELSKIQGLKLEELWLQGNPLCDTF
PDQSTYVRAIRDRFPKLLCLDGQVLPSAVTTDVDTPCVVKPCKGNYFGSDELKSLVLQFL
QQYYLTHDCGDQQGLMGAYHEEACFSLTIPFHPEDPDPSSLCEYFKDSRNMKKLKDPYLR
VQLLKHTKHDIVHTLCVLPKTQHDFSSFVVDTWFQTETMLCFSVNGLFKEVEGSSQGCVR
AFTRTFITTPASSSSLFIMNDELFVWDVSPKKTQSTFCIPVPTPSTSSMPSFYWEQQQMV
QAFSTQSGMNLQWSQKYLQDNEWNYTRAGQVFSMLKTEGKIPEEAFKEIP
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcatatgactgtgtggagaaacagaaaacctctggagagagaaatgggggaggacaca
caagatggaaccccagggagctggttcagtgtcacaattccttctgggataaagtatgac
aggacatggctaatgaactcaatccagagccattgcagtgtccccttcactccagtggac
ttccactttgtgaaaaaaggggctcggttctttgtccaggaagctagcactgcctctgca
ttgatgaatgtcagctacaagatttgtgacgaggagagacgaaagatacctgtctttgtc
agcccctctgctgttccctactctgtgcgggataagttgaagccagaagaaatggagcag
ctaaagctgaccttgatcaaacgatttgatgtctccaagcaagctcttgacctccagagg
ctctgcgttgacccagacttggtgggacatgatattgatataattctgaatcgaagaagc
tgcatggccgccaccctgcaaaccatcagaaagaatttccctgagctgttgtccttgaac
ttgagcagcaacagtctgtaccagctggatggcctgtctgacattatacagatggccacc
agggtcaaggtcctgaacctctccaaaaataagctgaagtctgtgtgggagttgagcaag
atacaagggctgaagcttgaagagctgtggctgcaagggaacccactgtgtgacaccttc
ccagaccagtccacctatgtaagggccatcagagatcgtttcccgaagttattatgccta
gatggccaggtgttaccatcagcagttaccactgacgttgacactccctgcgtagtaaag
ccctgcaagggaaactactttggatctgatgagctgaagagcctagtcctgcaattcctg
cagcagtactacttgacccatgactgtggagaccaacagggtctcatgggtgcttatcac
gaggaggcctgcttctccctgaccattcccttccatcctgaggacccagacccgagtagc
ttgtgcgagtacttcaaggacagcaggaatatgaagaagctgaaggacccttacctgcgg
gtccagctactgaagcacacaaaacatgacattgtgcacaccctctgtgtgttgcccaag
actcagcatgacttcagctccttcgtggtggacacgtggttccagacggaaacgatgctc
tgcttctctgtcaatgggttgttcaaggaagtggaaggaagttctcagggctgtgtgcgt
gccttcacccggaccttcatcactacccctgccagctcttccagtcttttcatcatgaat
gacgagctgtttgtatgggatgtcagccctaaaaagacccagagcacattctgcatccca
gtacccacaccctccaccagctccatgcccagtttctactgggagcagcagcaaatggta
caagctttctccactcagtctgggatgaacctccagtggtctcagaagtatcttcaggac
aacgaatggaactacaccagagctggtcaggtcttcagtatgctcaagaccgagggcaag
atcccagaggaggccttcaaagaaatcccctaa

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