Physeter macrocephalus (sperm whale): 102977287
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Entry
102977287 CDS
T06011
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102977287 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102977287 (PDS5A)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
102977287 (PDS5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
Cnd1
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
102977287
NCBI-ProteinID:
XP_023974056
Ensembl:
ENSPCTG00005015289
UniProt:
A0A2Y9FBE7
LinkDB
All DBs
Position
7:79134634..79273832
Genome browser
AA seq
1399 aa
AA seq
DB search
MDFSTAQPKPAPALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDS
EDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLF
ITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSH
NKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTI
EACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEER
LAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK
DLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAM
MGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLE
TEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKL
MTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLAN
PKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSG
LELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRST
LIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVS
LGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAI
KLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKL
AQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKD
PVKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQ
DVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTKDAQSPDESKTNEKLYTVC
DVALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPAG
VLGAVNKPLSATGRKPYVRSTGAETGSNINVNSELNPSTGNRSREQSSEAAETGVSENEE
NPVRIISVTPVKNIDPVKNKEINSDQAAQGNISSDRGKKRTVTAAGAENIQQKTDEKVDE
SGPPAPSKPRRGRRPKSESQGNATRNDDINKPLSKGRKRAAVNQESPGGLEAGNAKAPKL
QDIAKKAAPAERQIDLQRSQVLGSDGDSLWDIESSPGNSSSDLDRLKVCESSQEDTEDSE
LVKGSFLKVKRKFICKGRK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgaccgcgcagcccaagcctgcccctgccctctgtggcgtcgtgagtgcc
gacgggaagatcgcttaccctccaggggtaaaggagatcaccgacaagatcaccaccgac
gaaatgatcaaacgactgaagatggtagtcaaaacttttatggatatggatcaggattca
gaagatgaaaaacagcagtatctcccactagccctgcatctagcatctgaattttttctc
aggaatcccaataaagatgtgcgtctccttgtagcatgctgtttggctgacatctttaga
atctatgccccagaagctccatatacttcccacgataaacttaaggacatatttttgttt
attaccagacaattaaagggtttggaggatacaaagagcccgcagtttaatagatacttt
tatttattagagaatttagcttgggttaaatcatataacatctgctttgaattggaagat
tgcaatgaaatttttattcagctttttaggactctcttctcagtgatcaacaatagccac
aataagaaggtacaaatgcacatgctagacttgatgagttctatcatcatggaaggtgat
ggagttactcaagaattattggactccattcttattaacctcattcctgcacataagaac
ttaaataaacagtcctttgacctcgcaaaagtcctattgaaaaggacagtccagactatt
gaggcatgcattgccaattttttcaatcaagtcctggtgctgggaagatcatcagtaagt
gatttgtcagaacatgtatttgatctgattcaggaactttttgctatagatcctcattta
ttattatctgtcatgccgcagcttgaattcaaactgaagagtaatgatggagaagagcga
ttagctgttgttcgacttttagctaaattgtttggttctaaagattccgatttggcaacc
cagaatcgtcctctgtggcagtgttttcttggacgattcaatgacattcacgttcctgtg
agattagaaagtgtgaaatttgcgagtcactgtttaatgaatcacccagatttggcaaag
gatctcacagaatacttgaaagttagatcacatgatccagaagaagctattcgtcatgat
gtcattgttactataataacagctgccaaaagagaccttgccttagtaaatgatcagcta
cttggttttgtaagagaaagaacactggacaaacggtggcgagtaagaaaagaagctatg
atgggtctggctcagctttataagaaatactgtcttcatggtgaagcaggaaaggaagct
gcagagaaagtcagctggataaaggacaaacttttgcatatctattatcagaatagcatc
gatgacaaactgttggtagagaaaatctttgctcagtatcttgtcccccacaacctggaa
acagaagagagaatgaaatgcttgtattatttatatgctagtttggatccaaatgctgtc
aaagctctcaatgaaatgtggaagtgtcagaacatgcttagaagtcatgtacgagaactg
ttggatttgcacaagcagcctacgtctgaggctaactgttctgccatgtttggaaaactg
atgaccatagcaaagaatttgcctgaccctgggaaagcacaagattttgtgaagaaattt
aaccaagtcctcggtgatgatgaaaaactgcggtctcagttggagttgttaatcagtcca
acctgttcgtgcaaacaggcagatgtttgtgtgagagaaatagcccggaaacttgcaaat
cctaagcagccaacaaatcctttcctagaaatggtcaaatttctgttggaaagaattgca
cctgtgcacattgattcagaagccatcagtgcactggtaaaactaatgaataaatcaata
gaggggacagcagatgatgaagaggagggtgtaagtccagatacagctattcgttcagga
cttgaacttcttaaggttctgtctttcacacatcctacctcgttccactctgcagagaca
tatgagtccctgttacagtgcctcagaatggaagatgacaaggtagcagaagctgctata
caaatttttagaaatacaggccacaaaatagaaacagacctaccccagatacgatcgacc
ttaattcccatcttacatcagaaagcaaagagaggtactccccaccaagcaaaacaggcc
gttcactgtatacatgccatattcacaaataaagaagtacagcttgcacagatttttgag
ccactcagtaggagtctcaatgctgatgtaccagaacaacttataactccattagtttca
ttgggccacatatctatgttagcaccagatcagtttgcttccccaatgaaatctgtagta
gcaaattttattgtgaaagatctgctaatgaatgacaggtcaacaggtgagaagaatggg
aaattatggtctccagatgaagaggtttcccctgaagtactagcaaaggtacaggcaatt
aaacttctggtaaggtggctgttgggtatgaaaaacaaccagtctaaatctgccaattca
actcttcggttattatcagcgatgttggttagtgagggtgacctgacagagcaaaagaag
atcagtaaatctgatatgtctcgcttgcgattagctgctggtagtgccataatgaagctt
gctcaggaaccttgttaccatgaaattataaccccagaacagtttcagctctgtgcgctt
gttattaatgatgagtgctatcaagtaaggcagatatttgctcagaagctacataaggca
cttgtgaagttactcctcccattggagtacatggcgatctttgccttgtgtgccaaagat
cctgtgaaggagagaagagcacatgcacgacagtgtttactaaaaaatatcagtatacgc
agggagtacattaaacagaaccccatggctactgagaaattattatcactgttgcctgag
tatgtagttccgtatatgattcacctgctagcccatgatccagattttacaagatcacaa
gatgttgatcaacttcgtgatattaaagagtgcctatggttcatgcttgaagttttaatg
acaaagaatgaaaataacagccatgcctttatgaaaaagatggcagagaacatcaagcta
acaaaagatgcccagtctccagatgaatcgaagacaaatgaaaaactttatacagtgtgt
gatgtggccctgtgtgttataaatagtaaaagtgctttgtgcaatgcagattcaccaaag
gatccggtccttccaatgaaattttttacacaacctgaaaaggacttctgtaatgacaag
agttatatttcagaagagacaagagtacttctgttaacaggaaagccaaaacctgctgga
gtactaggtgcggtaaacaagcctttatcagcaacgggaaggaaaccatatgttagaagc
actggagctgagactggaagcaatattaatgtaaattcagagctgaacccttccaccgga
aatcgatcaagggaacagagttcagaggcagcagaaactggagttagtgaaaatgaagag
aaccctgtgagaattatttctgtgacacctgtaaagaatattgacccagtaaagaataag
gagattaattctgatcaggctgcccagggcaacatcagcagtgaccgaggaaagaaaaga
acagtaacagcagctggtgcagagaatatccaacaaaaaacagatgagaaagtagatgaa
tcaggaccacctgccccttcaaaacccaggagaggacgtcgacccaagtctgaatctcag
ggcaatgcaaccagaaatgatgatataaataaacctcttagcaagggaagaaagagagcc
gcagtcaatcaggaaagccctggaggtttggaagcaggtaatgccaaagcacccaaactg
caagacatagccaaaaaggcagcaccagcagagagacaaattgacttacaaagaagccaa
gtgctcggaagtgatggcgattcactttgggacatagaatcaagtccaggaaattcttcc
agtgatctggatcgtttaaaagtctgtgagagcagccaggaagatactgaggactcagag
ctagtaaagggaagcttcctgaaggtaaaaagaaaattcatttgcaaagggagaaaatga
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