Physeter macrocephalus (sperm whale): 102977311
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Entry
102977311 CDS
T06011
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04613
Neutrophil extracellular trap formation
pcad05014
Amyotrophic lateral sclerosis
pcad05034
Alcoholism
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102977311 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102977311 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102977311 (HDAC6)
09165 Substance dependence
05034 Alcoholism
102977311 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcad01009
]
102977311 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977311 (HDAC6)
04131 Membrane trafficking [BR:
pcad04131
]
102977311 (HDAC6)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102977311 (HDAC6)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102977311 (HDAC6)
Protein phosphatases and associated proteins [BR:
pcad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102977311 (HDAC6)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102977311 (HDAC6)
Membrane trafficking [BR:
pcad04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102977311 (HDAC6)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102977311 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
LysX_preATP_grasp
PSGP
Motif
Other DBs
NCBI-GeneID:
102977311
NCBI-ProteinID:
XP_007123890
Ensembl:
ENSPCTG00005006652
UniProt:
A0A2Y9FIE2
LinkDB
All DBs
Position
21:complement(31379117..31398017)
Genome browser
AA seq
1142 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKVAVLRSSPNLAEVKKKGRMKKLS
QAAEQDLVVGLQGLDLNREARSLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLTASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVSLEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLEFPGAPCPSA
QASISCALEALEPFWEVFVRSAETLEEDTVEGDNVEEKEEEGPWQPPELPILTWPVLQAR
TGLVYDQQMMDHYNLWDNHHPEMPQRIKRIMHHLEELGLAGRCLALPARPATDAELLACH
SAEHVDRLRATEKMKTRELHREGANYDSIYICPSTFTCAQLAAGAACRLVEAVLAGEVLN
GIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGRALRILIVDWDVHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRLGDADYLVAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGSCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTHSLLGDPPPLLTLLRPPLSGALASITETIQVHRRYWCSLRVTKVK
DKGEPSSSKLITKEAPQPANPGSAKGMTMPEGNILEAGTGKATSATSVKESTPGQTMSET
AVMEFTQDQSSETAMGGAAALNQATSEAATGVATLDQTTSEEAVGGAELIQSPPASCADN
QTPPASPMQGATTQISPSKLTGNLRTLELDKAQEPPEEEELLGEAAGGQDMNESVLMQVT
GYHADTDQAMFYAVTPLLWCPHLVAVCPVPEAGLDVTQPCQDCGALQENWVCLSCYQVYC
SRYINAHMLQHHEGSGHPLVLSYTDLSTWCYHCQAYVHHEALLAVKNIAHQNKSGENMPH
SH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatcct
cattcccccccgcatgactccagcgtcacctcgaagcgaggtgttaaaaaggttgccgta
ctccgctccagccccaatctagcggaggtaaagaagaaaggcagaatgaagaagcttagt
caagcagctgagcaagacctagtcgtggggctgcaagggctggatctgaaccgggaggcc
aggtcactgtctggcactggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggagcagctgatc
caggagggcctcctggatcgctgtgtgtcctttcaggcccgatttgccgaaaaggaggag
ctgatgttggttcacagtctagaatacattgatctgatggagacgacccagtacatgaat
gagggggaactccgtgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgcgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctgggg
gctgagatccggaatggcatggcgataatcaggcctcctggacaccacgcccagcacagt
cttatggacggttattgcatgttcaaccacgtggctgtggctgcccgctatgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgtgcaccatggtcaaggaaca
cagttcacctttgaccaagaccccagcgtcctctatttctccatccaccgctatgagcag
ggtcggttctggccccaccttacagcctccaactggtccaccacaggttttggccaaggc
cagggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatc
gccgctttcctgcacgtcctgctgccagtttcccttgagttccagccccagctggtcctg
gtagctgctggatttgatgccctccaaggggaccccaagggcgagatggctgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctc
tcactggagggtggctacaacctccgctccctggctgagggcgtcagcgcctcactccac
acccttctgggagacccttgccccgtgctggagttccctggagccccttgcccgagtgcc
caggcgtcgatctcctgtgctctggaagcccttgagcccttctgggaggtctttgtgaga
tcagctgagaccctggaggaggacactgtggagggggacaatgtggaggagaaggaggag
gagggaccgtggcagccccctgagctcccaatcctgacgtggccggtgctgcaggctcgc
acagggctggtctatgaccaacagatgatggatcactacaacttgtgggacaaccaccac
cccgagatgcctcagcgaatcaagcgtatcatgcaccacctggaggagctgggtcttgcc
gggcgctgtctcgccctgcccgcacgtccagccacggacgctgagctgctcgcctgccac
agtgctgagcacgtggatcgtctgcgggccacggagaagatgaagacccgggagctgcac
cgcgagggcgccaactatgactccatatacatctgccccagcaccttcacctgtgcgcag
ctggctgctggcgccgcctgccgcctggtggaggctgtgctggcgggagaggttttgaat
ggcattgctgtggtgcgtccccctggccaccatgcagagcgggatgccgcttgcggtttc
tgctttttcaactctgtggctgtggctgctcgccatgcccaggccgtcagtgggcgtgcg
ctgcggatcctgatcgtggactgggacgtccatcatggtaatggaactcagcacatattt
gaggaggaccccagcgtgctgtacatttctctgcaccgctatgatcatggcaccttcttt
cctatgggggacgagggtgccagcagccagataggtcaggctgcaggcacgggcttcacc
gtcaacgtggcctggaatgggccccgcttgggtgacgccgactacctggttgcctggcat
cgtctggtgcttcccattgcctatgagtttaacccggaactggtgctggtctcagctggc
ttcgatgctgcccggggggacccactgggcagctgccaggtgtcgcctgagggctatgcc
cacctcacccacctgctgatgggcctggccaatggccgcattatccttatcctagagggt
ggttataacctgacatccatctcggagtccatggccgcctgcacccactccctccttggg
gacccgccacccctgctgaccctgctgaggcccccactgtcaggggccctggcctcgatc
accgagaccatccaagtccatcgcagatactggtgcagcttgcgggtcacaaaggtcaaa
gataaaggggaaccctccagttctaagttgatcaccaaggaggcaccccagccagccaat
cctgggtcagccaaggggatgaccatgccagaagggaacatcctggaggcaggcacgggg
aaggccacctcagcaacatctgtgaaagagtccactccaggccagactatgtcagagaca
gctgtgatggagttcactcaggaccagtcatcagagacagccatgggaggagctgctgcg
ctgaaccaggccacctcagaggcagccacaggggttgccacactggaccagaccacctcg
gaggaggctgtggggggagctgagctgatccaaagccctccagcctcatgcgctgacaat
cagactcctccagcgtcacccatgcaaggagccacaacccagatatcccccagtaagctg
actggaaatctcaggaccttggaactagacaaggcacaggaacccccagaagaggaggag
ctactaggagaggcagctggaggtcaggacatgaatgagtcagtactgatgcaggtcact
ggataccatgctgacactgaccaagccatgttttatgctgtaacaccactgctctggtgt
ccccatttggtggcagtatgccctgtacctgaagcaggcctggatgtcacccaaccttgt
caggactgtggagcactccaggagaactgggtgtgtctgtcttgctaccaggtctactgc
agtcgttacatcaatgcccatatgctccaacaccatgaaggctcgggacacccgctggta
ctcagctacaccgacctgtctacctggtgttaccactgtcaagcctacgttcaccatgag
gctctcctagctgtgaagaacatcgcccaccagaacaagtctggggagaacatgccccac
tcacactaa
DBGET
integrated database retrieval system
