Physeter macrocephalus (sperm whale): 102977382
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Entry
102977382 CDS
T06011
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03272
Virion - Hepatitis viruses
pcad03273
Virion - Lassa virus and SFTS virus
pcad04140
Autophagy - animal
pcad04142
Lysosome
pcad04145
Phagosome
pcad05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102977382 (LAMP1)
03272 Virion - Hepatitis viruses
102977382 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102977382 (LAMP1)
04142 Lysosome
102977382 (LAMP1)
04140 Autophagy - animal
102977382 (LAMP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
102977382 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102977382 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102977382 (LAMP1)
04090 CD molecules [BR:
pcad04090
]
102977382 (LAMP1)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102977382 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
102977382 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
102977382 (LAMP1)
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
102977382 (LAMP1)
CD molecules [BR:
pcad04090
]
Proteins
102977382 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
YiiD_C
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
102977382
NCBI-ProteinID:
XP_054945415
Ensembl:
ENSPCTG00005004277
UniProt:
A0A9W2X225
LinkDB
All DBs
Position
13:81141873..81161663
Genome browser
AA seq
412 aa
AA seq
DB search
MAAPGGARRWLLPLLLFAGLVRGASAVFVVKDGNGTACIMANFSAAFLTSYDTKNGSKSV
TFELPASAEVLNSSSCGKGNASDSSLEIAFGRGHTLTLSFTRNATRYGVQLMRFVYNLSD
TGIFPNSSSKETKTVESVTDIKADINTKYRCVSSRQVHLHNVTITLRDATIQAYLSNNSF
SREETHCEQDGPSPPPPTAPARPSPRPTAPESPSVSRYNVSGANGTCLLASMGLQLNVTY
STRGNTTVTREFNIDPSKTTFGGSCTAQLVTLALRSGNLLLELQFAMNASSSRVFLQGVQ
LTMTLPDARDPTFKAANSSLRALQATAGNSYKCNAEERVRVTEAFFLNIFRVWVQAFHVD
GDKFGPAEECQLDEDSTLIPIAVGGALAGLVLSVLIAYLIGRKRSHAGYQTI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggcggcgcccggcgatggctactgcccctgctgctgttcgcaggcctc
gtgcgtggtgcgtcagctgtgtttgtggtgaaagatggcaatgggacagcttgtatcatg
gccaacttctctgctgccttcttgaccagctatgacaccaagaatggttctaagagcgtg
acctttgagctgccggccagtgcagaagtattaaatagcagctcttgtggcaaaggaaat
gcttctgactccagtctcgagatcgcttttggaagaggccatacgctgaccctcagtttc
acaagaaatgcaacacgctacggtgtccagctgatgcgttttgtttataacttgtcagat
acaggcattttccccaattcgagctccaaggaaaccaagactgtggaatccgtaaccgac
atcaaggcagacataaatacaaagtacaggtgtgtgagcagtaggcaggtccacctgcac
aacgtgaccatcacgctccgtgacgccaccattcaggcctacctctccaacaacagcttc
agcagggaggagacgcactgtgagcaagacgggccctcaccgccccccccgacggcgccg
gcccggccctcgccccgcccgacggcgcccgagagcccctcggtgtccaggtacaacgtg
agcggtgccaacgggacctgcctgctggccagcatggggctgcagctgaacgtcacctac
agcacgaggggcaacacgacggtgaccagagagttcaacatcgaccccagcaagaccacc
ttcggggggagctgcacagcccagctggtgaccctggcgctccgcagcgggaacctgctc
ctggagctgcagtttgcgatgaatgcaagttccagccgggttttcctgcagggagtccag
ctgactatgaccctgcccgatgccagagaccccaccttcaaggccgccaacagctcgctg
agggcgctgcaggccaccgccgggaactcctataagtgtaacgccgaggagcgcgtgcgg
gtcaccgaggccttcttcctcaacatattcagagtgtgggtccaggcgttccatgtggac
ggggacaagtttgggcctgcggaggagtgccagctggatgaggacagcacgctgatcccc
atcgccgtgggcggcgccctggcggggctggtcctcagcgtgctcatcgcctaccttatc
ggccggaagaggagccacgccggctaccagaccatctag
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