Physeter macrocephalus (sperm whale): 102977563
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Entry
102977563 CDS
T06011
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05017
Spinocerebellar ataxia
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102977563 (ATXN2)
05017 Spinocerebellar ataxia
102977563 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
102977563 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977563 (ATXN2)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102977563 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
102977563
NCBI-ProteinID:
XP_023976603
Ensembl:
ENSPCTG00005019067
UniProt:
A0A2Y9SDZ2
LinkDB
All DBs
Position
19:16942458..17088112
Genome browser
AA seq
1097 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHTPPSEATAPPAARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSLE
AKDSRLQDQRQNSSAGNKENMKPNETSPSFSKAESKGISPIVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISP
SILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSF
SQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPM
TPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQ
QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAM
YACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGS
HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQT
VFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQS
ALQPIPVSTTAHFPYMTHPSVLVQVSLEKDKTERCSLWWLEVCFRRRKAGQRWAVPKVHI
LTLTLILNDQRQKIYTR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aacggaggtatatatgaaggagtttttaaaacatacagtcctaagtgtgatttggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcggattttgttgtggtacagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagagaaggacctggagccctgggatgcaggtgaactcactaccagtgaggaactg
gaggctttggaaaatgatgtttctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggtgtagtgtctacatatgatagcagtctatcttcatatacggtgccc
ttggaaagggataactcagaagaatttttaaaacgagaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgcccagtataaagcccgggtggccctggaaaatgatgatagg
agcgaagaagaaaaatacacagcagtacagagaaattccagtgaacgtgagggccacaac
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtggacgacagaattcaccacgtatgggccagcctggatcgggctccatgcca
tcgagatccacctctcacacttcagatttcaacccaaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggttccatttccagt
ggcctagaatttgtatcccataccccaccaagtgaagcgactgctcctccagcagcaagg
accagtcccgcagggggcacatggtcatcagtggtcagcggggttccaagattatcccct
aaaactcacagacccaggtctcccagacagaacagtattggaaatactcctagtgggcca
gttcttgcttctccccaagctggtattattccagctgaagctgttgctatgcctgtacca
gctgcatctcctacgcctgccagtcctgcatccaacagagctgtaaccccatctcttgag
gctaaagattccaggcttcaagatcagaggcagaactcttctgcagggaataaagaaaat
atgaagcccaatgagacatcacctagcttctcaaaagctgaaagtaaaggtatatcacca
attgtttctgaacatagaaaacagattgatgatttaaagaaatttaagaatgactttagg
ttacagccaagttctacttctgaatctatggatcagctgctaaacaaaaatagagaggga
gaaaaatcaagagatttgatcaaagacaaaattgaaccaaatgctaaggattctttcatt
gaaaatagcagcaactgcaccagtggcagcagcaagccgagcagtcccagcatttcccct
tcaatcctcagtaacacagagcacaagaggggacctgaggtcacatcccaaggggttcag
acttccagtccaggatgtaaacaagagaaagatgataaagaggagaagaaagacgcagct
gagcaagtgaggaaatcaacgttgaatcccaatgcgaaggagttcaaccctcgttccttt
tctcagccaaaaccttctaccaccccaacttcgcctcgtcctcaagcacaacctagccca
tctatggtgggtcatcagcagccaactccagtttatactcagcctgtttgttttgcacca
aatatgatgtatccagtcccagtgagcccaggagtgcaacctttatatcctatacctatg
acgcccatgcccgtcaatcaagccaagacatatagagcaggtaaagtaccaaatatgccc
caacaacgacaagaccagcatcatcagagtaccatgatgcacccagcctcagcagcaggc
ccaccaattgtggccaccccaccagcttattccacacaatatgttgcctatagtcctcag
cagtttccaaatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcat
gtctatagtcctgtaatacagggtaatgctagaatgatggcaccaccaacacatgcccag
cctggtttagtatcttcttcagcaactcagtacggggctcatgagcagacgcatgcgatg
tatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctactttgccatt
tccactggctcccttgcccagcagtatgcgcaccctaatgctaccttgcaccctcatact
ccacaccctcagccttcagctacccccactggacagcagcaaagccaacatggtgggagc
catcctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccacctg
gccagtccgcagcagcagtcagccatttaccatgcggggctcgcaccaaccccaccttcc
atgacacctgcctccaatacacagtcgccacagaatagtttcccaacagcacaacagacc
gtctttacgattcatccttctcatgttcagccggcttataccaatccaccccacatggcc
catgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcg
ccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagt
gcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcacccttca
gttctggttcaagtatctctagaaaaagacaagactgagagatgttctctttggtggcta
gaggtctgcttcagaaggaggaaggctggccagaggtgggcagtgccgaaagtccacatc
ctcaccctgacgctgattctaaatgatcaaaggcagaagatttataccagataa
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