Physeter macrocephalus (sperm whale): 102977563
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Entry
102977563 CDS
T06011
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin-2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05017
Spinocerebellar ataxia
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102977563 (ATXN2)
05017 Spinocerebellar ataxia
102977563 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
102977563 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977563 (ATXN2)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102977563 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
102977563
NCBI-ProteinID:
XP_023976603
Ensembl:
ENSPCTG00005019067
UniProt:
A0A2Y9SDZ2
LinkDB
All DBs
Position
19:16942458..17088112
Genome browser
AA seq
1097 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTSEEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHTPPSEATAPPAARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSLE
AKDSRLQDQRQNSSAGNKENMKPNETSPSFSKAESKGISPIVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISP
SILSNTEHKRGPEVTSQGVQTSSPGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSF
SQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPM
TPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQ
QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAM
YACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGS
HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQT
VFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQS
ALQPIPVSTTAHFPYMTHPSVLVQVSLEKDKTERCSLWWLEVCFRRRKAGQRWAVPKVHI
LTLTLILNDQRQKIYTR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aacggaggtatatatgaaggagtttttaaaacatacagtcctaagtgtgatttggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcggattttgttgtggtacagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagagaaggacctggagccctgggatgcaggtgaactcactaccagtgaggaactg
gaggctttggaaaatgatgtttctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggtgtagtgtctacatatgatagcagtctatcttcatatacggtgccc
ttggaaagggataactcagaagaatttttaaaacgagaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgcccagtataaagcccgggtggccctggaaaatgatgatagg
agcgaagaagaaaaatacacagcagtacagagaaattccagtgaacgtgagggccacaac
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtggacgacagaattcaccacgtatgggccagcctggatcgggctccatgcca
tcgagatccacctctcacacttcagatttcaacccaaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggttccatttccagt
ggcctagaatttgtatcccataccccaccaagtgaagcgactgctcctccagcagcaagg
accagtcccgcagggggcacatggtcatcagtggtcagcggggttccaagattatcccct
aaaactcacagacccaggtctcccagacagaacagtattggaaatactcctagtgggcca
gttcttgcttctccccaagctggtattattccagctgaagctgttgctatgcctgtacca
gctgcatctcctacgcctgccagtcctgcatccaacagagctgtaaccccatctcttgag
gctaaagattccaggcttcaagatcagaggcagaactcttctgcagggaataaagaaaat
atgaagcccaatgagacatcacctagcttctcaaaagctgaaagtaaaggtatatcacca
attgtttctgaacatagaaaacagattgatgatttaaagaaatttaagaatgactttagg
ttacagccaagttctacttctgaatctatggatcagctgctaaacaaaaatagagaggga
gaaaaatcaagagatttgatcaaagacaaaattgaaccaaatgctaaggattctttcatt
gaaaatagcagcaactgcaccagtggcagcagcaagccgagcagtcccagcatttcccct
tcaatcctcagtaacacagagcacaagaggggacctgaggtcacatcccaaggggttcag
acttccagtccaggatgtaaacaagagaaagatgataaagaggagaagaaagacgcagct
gagcaagtgaggaaatcaacgttgaatcccaatgcgaaggagttcaaccctcgttccttt
tctcagccaaaaccttctaccaccccaacttcgcctcgtcctcaagcacaacctagccca
tctatggtgggtcatcagcagccaactccagtttatactcagcctgtttgttttgcacca
aatatgatgtatccagtcccagtgagcccaggagtgcaacctttatatcctatacctatg
acgcccatgcccgtcaatcaagccaagacatatagagcaggtaaagtaccaaatatgccc
caacaacgacaagaccagcatcatcagagtaccatgatgcacccagcctcagcagcaggc
ccaccaattgtggccaccccaccagcttattccacacaatatgttgcctatagtcctcag
cagtttccaaatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcat
gtctatagtcctgtaatacagggtaatgctagaatgatggcaccaccaacacatgcccag
cctggtttagtatcttcttcagcaactcagtacggggctcatgagcagacgcatgcgatg
tatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctactttgccatt
tccactggctcccttgcccagcagtatgcgcaccctaatgctaccttgcaccctcatact
ccacaccctcagccttcagctacccccactggacagcagcaaagccaacatggtgggagc
catcctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccacctg
gccagtccgcagcagcagtcagccatttaccatgcggggctcgcaccaaccccaccttcc
atgacacctgcctccaatacacagtcgccacagaatagtttcccaacagcacaacagacc
gtctttacgattcatccttctcatgttcagccggcttataccaatccaccccacatggcc
catgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcg
ccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagt
gcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcacccttca
gttctggttcaagtatctctagaaaaagacaagactgagagatgttctctttggtggcta
gaggtctgcttcagaaggaggaaggctggccagaggtgggcagtgccgaaagtccacatc
ctcaccctgacgctgattctaaatgatcaaaggcagaagatttataccagataa
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