Physeter macrocephalus (sperm whale): 102977607
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Entry
102977607 CDS
T06011
Symbol
SNRPF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102977607 (SNRPF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102977607 (SNRPF)
03041 Spliceosome [BR:
pcad03041
]
102977607 (SNRPF)
03032 DNA replication proteins [BR:
pcad03032
]
102977607 (SNRPF)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
102977607 (SNRPF)
Spliceosome [BR:
pcad03041
]
Complex A
U1 snRNP components
Sm proteins
102977607 (SNRPF)
U2 snRNP components
102977607 (SNRPF)
Complex B
U1 snRNP components
102977607 (SNRPF)
U4/U6.U5 tri-snRNP components
102977607 (SNRPF)
Complex C
U2 snRNP components
102977607 (SNRPF)
DNA replication proteins [BR:
pcad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
102977607 (SNRPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
102977607
NCBI-ProteinID:
XP_007125191
Ensembl:
ENSPCTG00005005710
UniProt:
A0A2Y9FJP5
LinkDB
All DBs
Position
6:29428911..29437160
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcccctcaatcccaaacctttcctcaatggattaacaggaaagccagtaatg
gtgaagcttaagtggggaatggagtacaaaggctacctggtgtctgtagatggctatatg
aacatgcagcttgcaaacacagaagaatacatagatggagcattatctggacatctgggt
gaagttttaataaggtgtaataatgtcctttatatcaggggtgttgaagaagaagaagaa
gatggggaaatgagagaatag
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