Physeter macrocephalus (sperm whale): 102977754
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Entry
102977754 CDS
T06011
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X2
KO
K21112
synaptopodin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102977754 (SYNPO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
102977754
NCBI-ProteinID:
XP_007118427
Ensembl:
ENSPCTG00005022264
UniProt:
A0A2Y9FC94
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MEDSSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQTPPTPPPA
EVHSPATDASQNLPSPGATLITPASNSNHNLPATDVDQNPPATVTPQSLPLSSVQQNSSQ
AQLPPKGAVPDFKPSTPCAGGQPQEPAAEVRSSTLLIDKVSAPPTTTSTFSREVTPISSS
RPPAPDFMSSSLLIDVQLGAPVVSTEQEMSGPAAATTPTKLYSEVHLTLAKPPSVVNRTA
RPFGIQAPGGTSQMERSPMVERRHLGEKGPAPRPPSVADRSPRPQRHVMSHSPMLERRPV
AQRSPALERRPLGNFTPPPTYAETLSTAPLTSRVRSPPSYSALYPSSDPKPSHLKGQAVP
ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGGVGVEEEP
FALGAEASNFQQEPAPRGGASPSGAEEIVPEWASCLKSPRIQAKPKPRPNQNLSEASGKG
AELYARRQSRMEKYVIESSGHAERARCPSPTMSLPSCWKYPTHAPGGFRVASRSPARTPP
ASLYHGYLPENGVLRPEPSRQPPCQLRPSLFVLSPIKEPAKSLPTAASPAKPSSLDLAPS
LPKAALPPSPALPRPSRSSPGLYTSPGQDGLQPTAVSPTYSSDVSPVSPSRAWSPRAKQA
PRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcctcagaggaagccagcttgctgcggcacctggagaaggtggccagtgag
gaagaggaggtaccactggtggtttatttaaaggagaacgcggctctgctgacggccaat
gggctccacctgtcccagaaccgagaagcccagcagacacccccaactccacctccggcg
gaggtccacagtccagccacagatgccagccaaaaccttccctcacccggcgccacgctc
atcacaccagcttccaacagcaaccacaacctgccagccacagacgtcgatcagaaccca
ccggcaaccgtcaccccgcagagcctgccactgtccagcgtccaacagaattcttcacag
gcacagctcccgccgaagggtgcagtgccagatttcaaacccagcaccccgtgtgctggt
gggcaaccccaggagccagctgcggaggtgagatccagcaccctactaattgataaggta
tcagctccacctaccaccaccagcaccttctccagagaagttacccccatctccagctcc
aggcccccagccccagatttcatgtccagctccctgctcattgatgtccagcttggtgct
ccagtggtgtccacagaacaagagatgtccgggccggcagctgccaccacgcccaccaaa
ctgtacagcgaggtccacctcacgctggccaagcccccatctgtggtcaacaggacggcc
aggccctttgggattcaggcgccgggcggcaccagccagatggaacgaagccccatggta
gagagacgacatcttggagagaagggtcccgctccccggccccccagcgtggcagacagg
agccctcggccacagagacacgtcatgtcccatagccccatgctggagaggaggcccgta
gcacagcgaagccccgccttggagagacgtcccttggggaacttcaccccaccaccaacc
tatgccgagaccttgtccacagcccccctgacttcccgggttaggtctcccccctcttac
tctgccctgtaccccagctccgaccccaagccttctcatctaaagggccaggcagttcct
gccagcaagacgggcattttggaggagtcgatggcccgcaggggcagccggaaatccatg
ttcaccttcgtggagaagcccaaggtgaccccgaatccagacctgctggacctggtacag
acagcggacgagaagcggaggcagagagaccagggtggggtgggcgtggaggaggagccc
ttcgcgctgggggccgaggcctccaacttccagcaggagcccgcaccccggggcggggcc
agcccctcaggggccgaggagatcgtccccgagtgggcctcgtgcctcaagtcaccgcgc
atccaggccaagcccaagcccagacccaaccagaacctctccgaggcctctgggaagggg
gctgagctctacgcccgccgccagtcccgcatggagaagtacgtcatcgagtcttcgggc
cacgcggaacgggcccgctgcccttcacccactatgtccctgccttcgtgctggaagtac
cccacccatgcgcctggcggcttccgagtggcgtcccgaagcccggctcggaccccgcct
gcctccctctatcatggctacctgcctgagaatggggtcctgcgcccagagccctccagg
cagccaccctgccagctgcggccctctctctttgtcctctcacccatcaaggaacctgcc
aagtccttgcccacagccgcctcgcctgccaagccgagctccctggacctggcgcccagc
ctgcccaaggcggccctcccgccgtcgcctgccctgcctcggccctcccgctcctcccca
ggcctctacacctcccctggccaggatggcctccagcccactgccgtgagccctacctac
agcagtgatgtctcgcccgtgtctccctccagggcgtggtctccccgagccaagcaagcc
cccaggccctccttctccacccggaatgccgggatcgaggctcaggtgtggaagccttcc
ttctgcttcaagtaa
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