Physeter macrocephalus (sperm whale): 102977801
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Entry
102977801 CDS
T06011
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X2
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04360
Axon guidance
pcad04724
Glutamatergic synapse
pcad04726
Serotonergic synapse
pcad04929
GnRH secretion
pcad04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102977801 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
102977801 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
102977801 (TRPC1)
04726 Serotonergic synapse
102977801 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
102977801 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcad04040
]
102977801 (TRPC1)
Ion channels [BR:
pcad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102977801 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
102977801
NCBI-ProteinID:
XP_007126548
Ensembl:
ENSPCTG00005000111
UniProt:
A0A2Y9FMI5
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Position
1:complement(25660454..25724106)
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AA seq
794 aa
AA seq
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MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGM
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKDYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctttcgggcgcctcctcctcctccctgcct
tcctccccatcctcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctctacctaagccccatgcggttggctgtgaatgtacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgc
ttggccagtccagctttaataatgttaacagaggaggatccaattctgcgagcatttgaa
cttagtgctgatttaaaagaactaagccttgtggaggtggaattcaggaatgattatgag
gaactagcccggcaatgtaaaatgtttgctaaagatttacttgcacaagcccggaattct
cgcgaattagaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ctactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcccagtccaactgtcagcagttcctgaacactgtttggtttggacagatg
tcaggttaccgacgtaagcctacctgtaagaagataatgactgttttgacagttggcatg
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatt
attcacacaccttttatgaaatttattattcatggagcatcatattttacattcctgcta
ttactaaacttatactctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatcttcttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttagaagaatcacgtaatcaactcagt
tttgtcatgaattcactttatttggcaacctttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgatcggaaggactgggatgcattccatcctacactggtggcagaa
gggctttttgcatttgccaatgttctgagttatcttcgtctcttttttatgtatacaaca
agctctatcttgggtccattacagatttcaatgggacagatgttacaagattttggaaaa
tttcttggaatgtttcttctcgttttgttttctttcacaattggactgacacaactgtat
gataaagactatactccaaaagaacagaaggactgtgtaggcatcttctgtgaacagcaa
agcaatgataccttccattcgttcatcggcacttgctttgctttgttctggtatattttc
tccttagcacatgtggcaatctttgtcacaagatttagctatggagaagaattacagtcc
ttcgtcggagctgtaattgttgggacatacaatgttgtggttgtgattgtgcttaccaag
ctgctggtagcaatgcttcataaaagttttcagttgatagcaaatcatgaagacaaagaa
tggaagtttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacattaccc
ccacctttcaacatcattccttcaccaaagactatctgctatatgattagtagcctcagt
aaatggatttgctctcatacatcaaaaggcaaggttaaacggcagaacagcttaaaggag
tggagaaatttgaagcaaaagagagatgaaaactaccaaaaagtgatgtgctgtttagta
catcgttacttgacttccatgagacaaaagatgcaaagtacagatcaggcaactgtggaa
aatctaaatgaactgcgacaagatctgtcaaaattccgaaatgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattag
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