Physeter macrocephalus (sperm whale): 102978142
Help
Entry
102978142 CDS
T06011
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04151
PI3K-Akt signaling pathway
pcad04510
Focal adhesion
pcad04512
ECM-receptor interaction
pcad04810
Regulation of actin cytoskeleton
pcad04820
Cytoskeleton in muscle cells
pcad04933
AGE-RAGE signaling pathway in diabetic complications
pcad05100
Bacterial invasion of epithelial cells
pcad05135
Yersinia infection
pcad05146
Amoebiasis
pcad05165
Human papillomavirus infection
pcad05200
Pathways in cancer
pcad05205
Proteoglycans in cancer
pcad05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102978142 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102978142 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102978142 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102978142 (FN1)
04810 Regulation of actin cytoskeleton
102978142 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102978142 (FN1)
05205 Proteoglycans in cancer
102978142 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
102978142 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102978142 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
102978142 (FN1)
05100 Bacterial invasion of epithelial cells
102978142 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
102978142 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102978142 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102978142 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102978142 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
pcad00536
]
102978142 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
102978142 (FN1)
Membrane trafficking [BR:
pcad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
102978142 (FN1)
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
102978142 (FN1)
Glycosaminoglycan binding proteins [BR:
pcad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102978142 (FN1)
Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
102978142 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
102978142
NCBI-ProteinID:
XP_007100926
Ensembl:
ENSPCTG00005010889
UniProt:
A0A2Y9EFF6
LinkDB
All DBs
Position
2:complement(117659632..117728673)
Genome browser
AA seq
2477 aa
AA seq
DB search
MLGGPGPRLLLLTVLSLGTAVPSTGVSKSKRQAQQIIQPQAPLTVSQSKPGCYDNGKHYQ
INQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSMI
WDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCK
PIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSY
RIGDTWRKKDNRGNLLQCICTGNGRGEWKCERHTTLQTTSAGSGSFTDVRTAIYQPQPHP
QPASYGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAITQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALC
HFPFLYNNRNYTDCTSEGRRDNMKWCGTTRNYDADQKFGFCPMAAHEEICTTNEGIMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPIDQCQDSESRTFYQIGESWEKFLHGVRYQCYCYGRGIGEWGCQ
PIQTYPGSTGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWKPKNSPDRWKEATIP
GHLNSYTIKGLRPGVVYEGQLISVQHYGQREMTRFDFTTTSTSPVVTSNTVTGETTPFSP
VVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDL
LPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPQAPITG
YRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTG
VPRSDKVPPPRDLQFVEVTDVKITIMWTPPESAVTGYRVDVIPVNLPGEHGQRLPISRNT
FAEVTGLSPGVTYHFKVFAVNHGRESKPLTAQQTTKLDAPTNLQFINETDTTVIVTWTPP
RARIAGYRLTVGLTRGGQPKQYNVGPSATQYPLRNLQPGSEYSATLVAVKGSQQSPRVTG
VFTTLQPLGSIPPYNAEVTETTIVITWTPAPRIGFRLGVRPSQGGEAPREVTSDSGSIVV
SGLTPGVEYIYTISVLKDGQERDTPIVKKVVTPLSPPKNLHLETNPDTGVLTVSWERSTT
PDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPIS
DIIMPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSV
GYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPSPTDLRFTNIGPDTMRVTWAA
PPSIELTNLLVRYSPVKNEEDVAELSVSPSDNAVVLTNLLPGTEYLVSVSSVYEQHESVP
LRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYKIRHHPDHMSARPREDRVPPS
RNSITLTNLNPGTDYVVSIVALNGKEESPSLVGQQTTVSDVPRDLEVIAATPTSLLISWD
APAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGADYTITVYAVTGRGDSPA
SSKPVSIDYRTEIDKPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTTPKNGPGPSKTMT
AGPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIK
IAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEETAELQGLRPGSEYTVSVVALHDDM
ESQPLIGTQSTAIPAPTNLKFTQVSPTSLAAQWTAPNVQLTGYRVRVTPKEKTGPMKEIN
LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETT
ITISWRTKTETITGFQVDAIPANGQTPVQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDN
ARSSPVVIDASTAIDAPSNLHFLATTPNSLLLSWQPPRARITGYIIKYEKPGSPPREVVP
RPRPGVTEATITGLEPGVEYTIQVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGPE
ILDVPSTVQKTPFITNPGYDTGNGIQLPGTSGQQPSLGQQMIFEEHGFRRTTPPTMASPV
RHRPRPYPPNINEEIQIGPVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISWTPFQES
SEYIISCHPVGIDEEPLQFRVPGTSASATLTGLTRGATYNIIVEAIKDQKRHKVREQVVT
VGNSVDQGLNQPTDDSCFDPYTVSHYAIGEEWERLSESGFKLSCQCLGFGSGHFRCDSSK
WCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQ
KEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGHEGSTGHSYNQYSQRYHQRTNTNVNCPI
ECFMPLDVQADREDSRE
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggggtccggggccccggctgctgctgctgaccgtcctgtccctggggacagcc
gtgccctccactggagtctcgaagagcaagaggcaggctcagcagatcattcagccccag
gccccgctgactgtcagccaaagcaagcctggttgttatgacaatgggaaacactatcag
ataaaccaacaatgggagcgcacctacctgggcagtgccttggtctgtacctgttatgga
gggagccggggctttaactgcgagagcaagcctgaacctgaagagacttgctttgacaag
tacaccgggaacacttaccgggtgggcgacacttacgagcgccctaaagactccatgatc
tgggactgcacctgcattggggctgggcgagggagaataagctgcaccattgcaaaccgc
tgccatgaagggggtcagtcctacaagattggtgacacctggaggagaccacacgagact
ggtggttacatgttggagtgtgtgtgtctcggtaacgggaaaggagaatggacctgcaaa
cccatagctgagaaatgttttgatcacgctgctgggacttcctacgttgtcggggagacc
tgggaaaagccttatcaaggctggatgatggtggattgtacttgtctgggagaaggcagt
ggacgcatcacctgtacctccagaaacaggtgcaacgatcaggacactaggacatcctat
agaattggggatacctggcgcaagaaggacaatcgggggaacctgctccagtgcatctgc
accggcaacggccgtggcgagtggaagtgtgagaggcacacgaccctgcagaccacgtct
gccggatctggctccttcacagacgtccgaacggccatttaccagccacagcctcacccc
cagccggcttcatacggtcactgtgtcacggacagcggtgtggtttactccgtgggcatg
cagtggctgaagacacaaggaaataagcaaatgctttgcacttgcctgggcaatggagtc
agttgccaagagacagctataacccagacttatggaggcaattcaaatggggagccttgc
gtcctaccattcacctacaacggcaggactttctactcctgcaccacagaagggcgacag
gatggacatctctggtgcagcacaacttccaattatgagcaagaccagaaatattctttc
tgtacagaccatactgttttggttcaaactcgaggtggaaattccaatggtgccttgtgc
cactttcccttcctgtacaacaaccgaaactacaccgactgtacatccgagggcaggagg
gacaacatgaaatggtgtggaaccacacggaactatgatgctgaccagaagtttggattc
tgccccatggctgcccacgaggaaatctgtacaaccaatgaagggatcatgtatcgcatt
ggagaccagtgggacaaacagcatgatatgggccacatgatgagatgcacatgtgttggg
aacggtcgtggagaatggacatgtgtcgcctactcccagctccgagatcagtgcatcgtc
gacgacatcacatacaatgtgaatgacacattccacaaacgtcacgaagagggacacatg
ctgaattgtacctgcttcggtcagggcaggggccggtggaagtgcgatcccattgatcaa
tgccaggattcagaatcccgtaccttttatcaaattggagaatcatgggagaagtttttg
catggagtcaggtaccagtgctactgctatggccgtggcattggggagtggggctgccag
cccatacagacctatccaggttcaactggtcctgtccaagtaataatcactgagaccccc
agtcagcccaactctcaccccatccaatggaatgcaccagaaccatctcacatttccaag
tacattctcagatggaaacctaaaaattctccagaccgttggaaggaagccaccattcca
ggccacttaaactcctacaccatcaaaggcctgaggccaggcgtggtatacgagggccag
ctcatcagcgtccagcactacggccaaagagagatgacacgcttcgacttcaccaccacc
agcacaagcccagtggtgaccagcaacaccgtgacgggagagacaacacccttttctccc
gtcgtggccacctccgaatccgtgactgaaatcacagccagcagctttgtggtctcctgg
gtctcggcttccgacactgtgtccggattccgggtggagtatgaactgagtgaagaggga
gatgaaccacagtacctggatcttcccagcacagccacttccgtgaacatccctgacctg
cttcctggccgaaaatacattgtgaacgtctatcagatatccgaagaaggagaacagagt
ttgatcctgtctacctcacagacaacagcacctgatgcccctcctgaccctaccgtggac
caggttgatgacacctcgattgtcgttcgctggagcagaccccaggcgcccatcacagga
tacagaatcgtctattccccgtcagtagagggtagtagcacagaactcaaccttcctgaa
actgccaactctgtcactctcagtgacttgcagcctggtgttcaatataacatcactatc
tacgctgtggaagaaaatcaagagagtactcctgtcttcatccaacaggaaaccactggc
gtcccacgttcagataaagttcccccgcccagggacctgcagtttgtggaggtaacggac
gtgaagatcaccatcatgtggacaccccctgagagcgcggtgaccggttaccgagtggac
gtgatccccgtcaacctgcccggggaacatgggcagaggctgccaatcagcaggaacaca
tttgcagaagtcactgggctgtcccctggggtcacctatcacttcaaggtcttcgccgtg
aaccacgggagggagagcaagcctctgaccgcacaacagacgaccaaattggatgctccc
accaacctccagtttatcaatgagactgacaccaccgtcatagtgacctggactccacct
cgtgcccggatagccgggtaccgactgaccgtgggcctgacccgtggaggccagcccaag
cagtacaacgtgggtccctcggccacgcagtatccactgaggaatctgcagcctggctct
gagtactctgcaacccttgtggcggtgaaaggcagccagcagagccccagagtcactgga
gtcttcaccactctgcagcctctgggctccatcccaccttacaacgcagaagtgactgaa
accaccattgtgattacatggacgcctgctccaaggattggttttaggctgggtgtacga
ccaagccagggaggggaagcaccacgagaagtgacctcagactcaggaagcatcgttgtg
tctggcctgaccccaggcgtggaatacatttacaccatttcagtcctgaaagatgggcaa
gagagagatacaccaattgtaaagaaagtggtgacaccactgtctccaccaaagaacttg
cacctggaaacaaaccccgacactggcgtgcttactgtctcctgggagaggagtaccacc
ccagacattactggctatagaattaccaccacccctacaaatggccagcagggatattct
ttggaagaagtggtccatgccgatcagagttcctgcacttttgaaaacctgagtcctggc
ctggagtacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgtccctatctct
gatatcatcatgccagaggtgccccaactcactgacctaagctttgttgatataaccgat
tcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgcatc
acagtagttgcggcaggagaaggtatccctatttttgaagattttgtggactcctcagta
ggatactacacagttacagggctggagcctggcattgactatgacatcagcgttatcact
ctcattaatggcggagagagtgcccctactacactgacacaacaaaccgctgtcccttct
cccactgacctgcgatttaccaacattggtcccgacacgatgcgtgtcacctgggccgca
cctccatccattgaattgaccaacttactggtgcgctactcgcctgtgaaaaatgaggag
gatgttgccgaattgtcagtttctccttcagacaatgcagtggtcttaacaaatctcctg
cccggcacagagtatttagtcagcgtctccagtgtttacgagcagcacgagagcgtacct
cttagaggaagacagaaaactggtctcgattccccaaccggcattgacttttctgatatc
actgccaactctttcactgtccattggattgctcctcgagctaccatcaccggctacaag
atccgccatcatcctgaccacatgagtgcaagacctcgggaggatcgagtgcccccctct
cggaattccatcactctcaccaatctcaatccgggcacagattatgtggtcagcattgtc
gctcttaatggcaaagaggaaagtccttccttggttggccagcaaacaacagtttctgat
gttccaagggacctggaagtcattgctgcaacccccactagcctgttgatcagctgggat
gctcctgccgtcacagtgagatattacaggatcacctatggagaaacaggaggaaatagc
cctgtccaggagttcactgtgcctgggagcaagtctacagctaccatcagtggtcttaaa
cctggagcagactacaccatcaccgtttatgctgtcactggccgtggggacagcccggca
agcagcaagcccgtttccatcgattaccgaacagaaattgacaaaccatcccagatgcaa
gtgactgatgtccaggacaacagcattagtgtcaggtggctgccttcaagttcccctgtt
accggttacagagtgaccactactcctaaaaatggcccaggaccatcgaaaacaatgact
gcaggtccagatcaaacagaaatgaccattgaaggcttgcagcccacagtggagtatgtg
gttagtgtctacgctcagaatcgaaacggagagagtcagcctctggttcagacagcagta
accaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatcaaa
attgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgagccct
gaggatggaatccatgagctattccctgcacctgatggtgaagaagagactgcagagctg
caaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatg
gagagccagcccctgattggaacccagtccacagccattcctgcaccaaccaacctgaag
ttcactcaggtttcaccaaccagcctggccgcccagtggacggcacccaatgttcagctc
actggatatcgagtgcgggtgacccctaaggagaagaccggaccaatgaaagaaatcaac
cttgctcccgatagctcatctgtggttgtatcaggactcatggtggccactaaatatgaa
gtgagcgtctatgctcttaaggacaccttgacaagcagaccagctcagggagtcgtcacg
actctggagaatgtcagccctccaagaagggcccgtgtgacagatgctactgagaccacc
atcaccattagctggagaaccaagactgagacgatcaccggcttccaagtcgatgccatc
ccagccaacggccagactccagttcagagaaccatcaagccagacgtcagaagctacacc
attacgggtttacaacccggcactgactacaagatctacttgtacaccttgaatgacaac
gctcggagctcccctgtggtcatcgacgcctctactgccattgatgcaccatccaacctg
catttcctggccaccacacccaactccctgctgttatcatggcagccacctcgtgccagg
attactggttacatcatcaagtatgagaagcctgggtcccctcccagagaagtggtccct
cggccccgccctggtgtcacagaagctactattactggtctggaaccaggagtcgagtac
acaatccaagtcattgccctcaagaacaatcagaagagtgagcctctgatcgggaggaaa
aagacagatgagcttccccaactggtaacccttccacaccccaatcttcatggaccagag
atcctggatgttccctccacagttcaaaagacccctttcatcaccaaccctgggtatgac
actggaaacggtattcagcttcctggcacttctggtcagcagcccagtcttgggcaacaa
atgatctttgaggagcatggttttaggcgaaccacaccgcccacaatggccagccccgta
aggcataggccaagaccgtatccaccgaatataaatgaggagatccaaattggtcctgtc
cccaggggagacgtagaccatcatctctaccctcacgttctgggactcaatccaaatgct
tctacaggacaagaagctctctctcagacaaccatctcatggaccccattccaggaaagc
tctgagtatatcatttcatgtcatccagttggcattgatgaagaacccttgcagttccga
gttcctggaacttctgctagtgccaccttgacgggtctcaccagaggggccacctacaac
atcatagtggaggcaataaaagaccagaagaggcacaaggttcgggagcaagtagttacc
gtgggcaattctgttgaccaaggcctaaaccaacccacggatgactcgtgcttcgacccc
tacacggtttcccattacgccatcggagaggagtgggagcgattgtctgaatctggcttt
aaactctcatgccagtgcttaggctttggcagtggtcatttcagatgcgattcatctaaa
tggtgccatgataatggtgtgaactacaagattggagagaaatgggatcgtcagggagaa
aatggccagatgatgagctgcacgtgtctcggaaatggaaaaggagaattcaagtgcgat
ccccacgaggcaacgtgttacgacgatgggaagacgtaccacgtgggagaacagtggcag
aaagaatatcttggcgccatttgctcctgcacgtgctttggagggcagcggggctggcgc
tgtgacaactgccgcagaccaggggctgaacccggtcacgaaggctcaactggccactcc
tacaaccagtattcgcagagataccatcagagaacaaacactaatgtcaactgcccaatt
gagtgcttcatgcctttagatgtacaggctgacagagaagattcccgagagtaa
DBGET
integrated database retrieval system