Physeter macrocephalus (sperm whale): 102978259
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Entry
102978259 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102978259
03015 mRNA surveillance pathway
102978259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102978259
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102978259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Nup35_RRM_2
RRM_7
RBD_AKAP-17A
PAP1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102978259
NCBI-ProteinID:
XP_054941921
UniProt:
A0A9W2WRR4
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Position
7:37916603..37917919
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AA seq
293 aa
AA seq
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MHLSGVKKKSLLGVKEKNKKSSTRAPSPTKCKDRSDKKSKDHSKDKGATKESSENXLGRD
KTRTRRSASSGTSSTRSRSSSTSSSGSSSSSSSSSGSPSPSRRRQDNRRHSRSKSKLPRR
DEKERKRRSPSPQPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDVPVESMHPHLFKDYA
YVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPPPMWRRS
PPRMRRRSRSPRRRSPSRRSHRSRSSFNSSRHAGPPKLCPVTCIPSNSLLSLF
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaagaataaaaag
tccagcactagggctccttctcctaccaaatgcaaagaccgctctgataagaagtccaag
gatcactctaaagataagggggccaccaaggagtcaagcgagaatnatcttggcagggat
aaaacgcgaacgaggcgcagcgcttccagtggtaccagcagcacaaggtctcggtccagc
tcgacctccagctcgggctccagctccagctccagcagctcctctggctctccgagtcct
tctcggcgcaggcaggacaacaggcggcattcacgctccaaatccaaactacccagaaga
gatgaaaaggaaaggaaaaggcggagcccttcccctcaacccaccaaagtgcacattgga
aggctcactaggaatgtgaccaaggatcatatcatggagatattctccacctatgggaaa
attaaaatgattgacgtgcctgtagaaagtatgcacccgcatctgtttaaagactacgca
tatgtggagtttgagaatccagatgaggccgagaaggcgctgaagcacatggacggagga
caaatcgatggccaggagatcactgccactgctgtgctggccccgtggcctcggccaccc
cccaggcgattcagccctcccaggagaatgctgccaccgcctcccatgtggcgcaggtca
cccccacggatgaggagaaggtcgcgttctcctcggcgcaggtcccccagccgccgcagc
cacaggagccgctccagcttcaactcctcccgacacgcagggccaccgaagctctgccct
gtgacttgcatcccatccaactcacttttgtcacttttctag
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