Physeter macrocephalus (sperm whale): 102978293
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Entry
102978293 CDS
T06011
Symbol
SNRNP70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102978293 (SNRNP70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102978293 (SNRNP70)
Spliceosome [BR:
pcad03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
102978293 (SNRNP70)
Complex B
102978293 (SNRNP70)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
102978293
NCBI-ProteinID:
XP_007112465
Ensembl:
ENSPCTG00005009001
UniProt:
A0A2Y9F187
LinkDB
All DBs
Position
17:complement(12026193..12040481)
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AA seq
439 aa
AA seq
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MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA
ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE
RRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKERDRKRRSSRSRERAR
RERERKEELRGGGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRERERERRRSH
RSERERRRERERERDREHKRGERGGERGRDEARGGAGGGGQDNGLEGLGGDGRDMYMEPE
GGDGYLAPENGYLLEAAPE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcctgccacccaaccttctggctctctttgctccccgtgaccccatccca
tacctgccacccctggagaaactgccacatgaaaaacaccacaatcaaccttactgtggc
attgcgccatacatccgagagtttgaggaccctcgagatgcccctcctccaactcgagca
gaaactcgggaggagcgcatggagaggaagagacgggaaaagattgagcggcgacagcag
gaagtcgagacagagctaaaaatgtgggaccctcacaatgatcccaatgctcagggtgat
gccttcaagactctctttgtggctagagtgaactatgacacgacagagtccaagctccgg
agagagtttgaggtgtacggacccatcaaaagaatacatatggtctacagtaagcggtca
ggaaagccccggggctacgccttcatcgagtacgaacacgagcgagacatgcattccgct
tacaagcacgcagacggcaagaagatcgatggcaggagagtcctcgtggacgtggagagg
ggccgcaccgtgaagggctggaggccccggcggctaggaggtggcctaggcggaacccgg
agagggggcgctgacgtcaacatccggcactccggccgggacgacacctcccgctacgat
gagaggcccggcccctccccgcttccccacagggaccgggaccgggaccgcgagcgggag
cgcagggagcgaagccgcgagcgagacaaggagcgagaacgacgacgctcccgctctcgg
gaccggcggcggcgctcgcggagtcgcgacaaggaggagcggcggcgctccagggagcgg
agcaaggacaaggagcgggatcggaagcggcgaagcagccggagccgtgagcgggcgcgg
cgggagcgggagcgcaaggaggagctgcgaggcggcggaggtggcggcgacatggcggag
ccctccgaggccggcgacgcgcctcctgacgatgggcctcccggggagctgggtcccgac
ggccccgacggcccggaggagaagggccgggagcgggagcgggagcggcgccggagccac
cggagcgagcgggagcggcgccgggagcgcgagcgcgagcgcgatcgggagcacaagcgg
ggggagcggggtggcgagcggggcagggacgaggcccgaggcggggcggggggcggaggc
caggacaacgggctggagggcctgggcggcgacggccgggacatgtacatggagcccgag
ggaggcgacgggtacctggctccagagaacgggtatttgctggaggctgcgccagagtga
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