Physeter macrocephalus (sperm whale): 102978299
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Entry
102978299 CDS
T06011
Symbol
ABCA12
Name
(RefSeq) glucosylceramide transporter ABCA12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad02010
ABC transporters
pcad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102978299 (ABCA12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102978299 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102978299 (ABCA12)
Transporters [BR:
pcad02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102978299 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_30
SRP54
DUF4473
Motif
Other DBs
NCBI-GeneID:
102978299
NCBI-ProteinID:
XP_023980448
Ensembl:
ENSPCTG00005009725
UniProt:
A0A2Y9SQ76
LinkDB
All DBs
Position
2:complement(117296336..117488299)
Genome browser
AA seq
2595 aa
AA seq
DB search
MASPVHQLHVLIWKNWLGVKRQPLWTLVLIFWPVTIFIILAVTRTKFPPRPKPTCYLAPR
NLPSTGFFPLLQTLLCDTDSKCKDTPYGPEDLLRRKGIDDAQFKDSEILRKSSNLEKDSN
LSLQSTEVPEKRHTSLATVFPSPSSDLESNGTDTFNGSQVLAWILSLEKQNSTSEDIRRE
LCESYPRYTADYAFSWTTLGKNVFNIFCLSNMTLLESSLQELTNHFSQLSSDPNNQKTVF
QEMVKVLSFFSQVQEQTAVWQLLSSFPNVFQNDVTLRNLFDVLRSANSALLAMQKVYPRV
TTNEGFRTLSKSVKHLLYTLDSPSQGGSDNTTHVWSEEDGQSLSPSSLAAQLLILENFED
ALLNISVDSPYIPYLECVRNVTDNLARGSKENLRLLHSTIRFKKSFLQNGSYEDYFPLVP
EVLKSKLSQLRNLTKLLCEPETFSSLEKMCQLSSMDFGNLCEESAFHVQLLKAAEFSTEI
ATSLLYHDNILSEKLRDLLSGDPSKINLDMDWFLEQALQMNYLENITRLMPMIDAVLHVN
NSADTLEKPGQLIEMFKHVEELKEELRRTGMSNRSIDNLLAIPIPDNRAEIISSVFWLHS
CDANMTSPELEDAMKEFCSIPLPERSRLSYLIGLTLLHYLDIYNFTYKVFFPRENQKPVE
KMIELFIRLKEILNQMASVTRPLLDKMRSLKQMHLPRSFPLTQAMYRNNRLNATQGSFST
ISQALCSQGITTEYLVAMLPSSQRQRGNHTKDFLTYKLSKEQIAAKYGIPLHATPFCFSL
YKDIINMPAGPVIWAFLKPMLLGRIVYAPYTPVTKAIMEKSNVTLRQLAELKEKSQEWVD
KSPFFMNSFHLLNQTIPILQNTLRNPFVQVFVKFSVGLDAVELLKQMDELDSLRLKLENS
IDLIDHLNTLSSLTVNISSCILYDRIQAAKSIDEMETEAKRLYKSNELFGSVIFKLPSNS
SQHRSYDSEDVSLPPVVKYTIRMSLKTSQTTRSIRAKIWAPGPHNSPSNNQIYGRAFVYL
QDSIERAIIELQTGRNSQEIAVQVQAIPYPCYMKDNFLTSVSYSLPIVLMVAWVIFIAAF
VKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIIILIIILKFGNILPKTNG
FILFLYFSDYSFSVLAMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLVTIENELSCIV
KVFMNLLSPTAFSYASQYIARYEEQGIGLQWENMYSSPVQDDTTSFGWLCCLILADSFIY
FLIAWYIRNVFPGTYGMAAPWYFPFLPSYWKERFGCAEVKHEKSSVLMFTNIMMQNTSPS
ASKTSPEYVFPSNTESEPKDLTVGVALRGVTKNYGSKIAVANLSLDFYEGHITSLLGPNG
AGKTTTISLLTGLFEASAGNIFVYGKDIKTDLHTMRKNLGVCMQHDVLFSYLTTKEHLLL
YGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVI
LDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEDGGLRCCGSP
FYLKEAFGDGYHLTLTKKKSPNVNTSTVCDTTAVTSVIQSHLPEAYLKEDIGGELVYVLP
PFSTSVSGAYLSLLRALDNGLSDLNIGCYGISDTTMEEVFLNLTKGSQKNNGMSPEHLTQ
KKIGNPSTSGISTPDDLSMSSSNFTDRDDKILTTGEKLDGFGLLLKKVMAILIQRFHHTR
RNWKGFIAQVILPIIFVTTAMGLGTLRSSSNSYPEIQISPSLYGTSEQTAFYANSHPSTK
ELVSAMWSFPGIDNMCLNISDPRCLKKDSLGKWNSSGEPITNFGVCSCSETIQECPKFNY
SPPHRRTYSSQVIYNLTDHHLENYLISTANNFIQKRYGGWSFGLPLTKDLRFDITTVPAN
RTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAARHGIILYSHPYPGVQDQEEATM
RSLIDILVALSILLGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMAF
YLVPVAFSIGVIAIFKLPAFYSENNLSAVSLLLLLFGYATFSWMYLLAGLFHETGVAFIT
YVCINLFFGINSIVSLSVVYFLSKEKPNDATLELISETLKRIFLIFPQFCFGYGLIELSQ
QQSVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTTFFFLRLLINEWLINKLRLFFKK
FRSSPVIETIVEDEDVWAERFRVENGTNEYDLVQLHRLTKTYHLIHKKIIAVNNISIGIP
AGECFGLLGVNGAGKTTIFKMLTGDIIPTGGNILIRNKIGSLAHIDSDSSDGSLIGYCPQ
EDALDDLVTVEEHLYFYARIHGIPEKDIKETVHKLLRRLHLMPYKDKTTSMCSYGTKRKL
STALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTR
LAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHVKNAKVSMEPLTRFMQLHFPKTYLKDQHL
SMLEYHVPITAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKCYETADTS
SQVSTISTDSQDDQL
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccggttcatcagcttcacgtcctgatctggaaaaattggctaggtgtcaaa
aggcagccgctttggacacttgtcttgattttctggccagttactattttcataattttg
gctgttacccggaccaaatttcctccaagaccaaagccaacttgttaccttgcacctcga
aaccttcctagtactggcttcttcccattgctgcaaaccctactctgtgacacagactct
aaatgcaaagacacaccctatgggccagaagatctgcttcgtaggaaaggaattgatgat
gcacaatttaaagacagtgaaattctgagaaagtcatccaacctggagaaggacagcaat
ttatcactccagagcactgaagttccagaaaaaaggcacacatcactggccacagtattt
cctagtccaagttctgatttggaaagtaatggaacagatactttcaatggtagtcaagtg
cttgcctggatccttagtttggaaaagcaaaattcgacttcagaagatatacgaagagaa
ctgtgtgagagctatccaagatacactgctgattatgccttctcttggaccactctaggg
aaaaatgtttttaacatattttgcctgtccaacatgacccttttagagtcttctctccaa
gaactaacaaaccatttctctcagctatcaagtgatcccaataaccagaagacagtgttt
caggaaatggtcaaagtgctgtcctttttctcacaagtgcaagagcagacagctgtgtgg
cagcttctctccagttttccaaatgtgttccagaatgacgtgacactaagaaatctattt
gatgttcttcgaagtgcaaacagtgcgctgctggccatgcagaaggtttatccacgtgtt
acaactaacgaaggtttcagaactctcagtaaatctgttaaacatctgctttacactctg
gactccccatctcaaggtggctctgataatacaacacatgtgtggagtgaggaagatgga
cagtctctatccccaagcagcctggctgcacagctcctaatactggaaaactttgaagat
gccctcttaaatatatcagtagatagtccttatattccttacttggaatgtgtgagaaat
gtcactgacaatttggccaggggatcaaaagaaaatttaagactgctgcactctacaatt
cgatttaaaaaatcttttcttcaaaatggttcctatgaggattatttccctctagttcct
gaagtcttgaaatcaaaactgtctcaacttcgaaacttgaccaaacttctttgtgaacct
gaaactttcagttcactagagaaaatgtgccagctgtctagtatggactttgggaacctg
tgtgaagagagtgcgtttcatgtgcaactcctcaaagcagcagaattcagcaccgaaata
gccaccagtttactgtatcatgacaatattctatctgaaaaactgagggatttgctttct
ggggatccaagcaaaattaatttagatatggattggtttctagaacaggcattgcaaatg
aattacttggaaaatatcacacggttaatgccgatgatagacgccgtgctgcatgtcaat
aacagtgcagacaccttggaaaaaccaggtcagttaatagagatgtttaaacatgttgaa
gagctgaaagaagaactgaggagaacaggaatgtccaataggagtatcgacaatttgctg
gccattcccatccctgacaacagagctgagattatttctagtgtgttctggttgcattct
tgtgatgctaatatgaccagtcccgaattggaagatgcaatgaaggaattctgcagcata
cctcttccagagagatcccgtctgtcttacctcattggactcactcttctgcactactta
gacatttacaacttcacatacaaggtgtttttccctagggaaaatcaaaagccagtagaa
aagatgatagaactcttcataaggctaaaggagattctcaatcagatggcttctgtcaca
cgaccgctgctagacaaaatgagatccctgaaacaaatgcacctgcccagaagttttcca
ttaacacaggcaatgtacagaaacaaccggctaaacgctacgcaaggatcatttagtacc
atttcccaagcactgtgctcccaaggaattaccactgaatatttagttgccatgctaccc
tcttctcagaggcagagaggcaaccacaccaaggattttttgacttataaattaagtaaa
gagcaaattgctgcaaaatatggaattcccttacatgccacaccattttgcttttctctt
tataaagacatcattaatatgcctgctggacctgtgatttgggctttcttgaaacccatg
ttgttgggaaggattgtgtacgcaccatatacccccgtcacaaaggcaataatggaaaag
tctaatgtaactctgaggcagctggcagaattaaaagaaaaatctcaagagtgggtggat
aagtcaccatttttcatgaattccttccacctgttaaaccagacgattccaattctccag
aatactctaagaaacccctttgtccaagtttttgtaaaattctccgtgggacttgatgct
gttgaactcttgaaacagatggatgaactcgatagtctaaggctaaaattagagaacagc
attgacctcattgatcatcttaacacactgtcttccctgacagtaaatatttcctcctgt
atattatatgaccgtattcaggcagcaaaaagcatagatgaaatggaaacagaggctaaa
agactctacaaaagcaatgaactctttggaagtgttatttttaagcttccttctaatagc
agccagcacagaagctatgactctgaagacgtctctcttcctcctgttgtaaaatatacc
atccgcatgagtctcaagacctcacagaccacaagaagcataagagccaagatatgggcc
ccagggccacacaattctccgtcaaacaaccagatctatggcagggcttttgtttactta
caggatagtattgaaagagcaattattgaattgcagactggaaggaactcccaggaaata
gcagttcaggtccaagcaattccttatccctgctacatgaaagacaacttcctaaccagt
gtctcttattcccttccaatcgtgctcatggttgcctgggttatatttatagctgcattt
gtaaaaaaacttgtttatgagaaagacctccgacttcatgagtacatgaagatgatgggt
gtaaactcctgcagccacttttttgcctggcttatagagagtgttggatttttactggtt
accatcatcatcctcatcattatactcaagtttggcaatattcttcctaaaacaaatggg
ttcattttgttcctgtatttttcggactatagcttctcagttcttgccatgagctacctt
atcagtgtcttcttcaacaacaccaacattgcagctctgattggaagcctcatctacatc
attgccttttttccatttattgttctggttacaattgagaatgagttgagctgtatagta
aaagtattcatgaacctgctgtccccaacagctttcagctatgcaagtcagtacattgca
cgatatgaggagcagggcattggtcttcagtgggaaaatatgtacagttccccagttcag
gatgacaccacttcgtttggctggctatgctgtctaatcctagccgactctttcatttat
ttccttattgcttggtatatcaggaacgttttcccaggtacatatggtatggcagctcca
tggtattttccattccttccttcctattggaaggagcgattcggatgcgcagaagtgaag
catgagaaaagcagtgtccttatgtttactaatatcatgatgcagaacaccagcccatct
gccagtaagacaagtcccgaatacgtgtttccctccaacactgagtctgaacctaaagat
ctcacagttggagttgccctgcgtggggtcacaaagaactatggctcaaaaattgccgtt
gccaacctcagtctggacttttatgaagggcatattacttcactgctggggcccaatggc
gctgggaaaaccactaccatctccctgttgactgggctgtttgaggcttcagcaggtaac
atctttgtttatggaaaagatatcaaaacagatctccacaccatgaggaagaacctgggg
gtctgcatgcaacatgatgtcctgttcagttacctcactaccaaggagcacctcctctta
tacggctccatcaaagttcctcactggactaaaaagcagctgcacgaggaagtaaaaagg
actttaaaagatactggactatatagccatcgtcataagagagttggaacactgtcagga
ggaatgaagaggaagttatccatatccatagctcttattggaggatcaagggtggtaatt
ttagatgaaccatccactggagttgacccatgctctcgccgaagtatatgggatgttata
tccaagaacaaaactgccagaacaatcattctgtcgacccaccacttggacgaggctgaa
gtgctgagcgaccgcatcgccttcctggaggacggtgggctgcgctgctgcgggtcacca
ttttatctcaaggaagcctttggcgacgggtatcacctcacactcacaaagaaaaagagt
ccaaatgtaaatacaagtacagtatgtgacacgacagctgtgacatcagtgatccaatca
catctccctgaagcctacctcaaggaggacatcgggggagagcttgtctatgtgcttcct
ccgtttagcaccagcgtctcaggggcctatctttcactcctgagagcactggacaatggc
ctgagtgacctcaacatcgggtgctatggcatttcagataccaccatggaagaggtcttt
ctgaacttgactaaagggtcacagaaaaataatggtatgagtcctgagcacttaacacaa
aagaaaattggaaatcccagtaccagtggcatctcaactcctgatgatttatctatgagc
agcagcaatttcacagacagagatgacaaaatcctgaccacaggggagaaattagatggt
tttggactgttactgaagaaggtaatggctatactcattcagaggttccaccacacccgc
aggaactggaaaggtttcatagctcaggttattctccccataatctttgtaaccactgcc
atgggccttggcacgctaagaagttccagcaacagctatccagagatccagatctcccca
tctctttacggtacctccgaacagacagccttctatgcaaattctcacccaagcacaaaa
gaactggtctcagcaatgtggagcttccctggcattgacaacatgtgtttgaatatcagt
gatccaaggtgtttaaagaaagacagtctgggaaaatggaacagcagtggagaacctatc
actaattttggtgtttgctcctgctcagaaactatccaggaatgtcctaaatttaactat
tctccacctcatagaagaacttattcttcccaagtaatttataacctcactgaccaccac
ttggaaaactatcttatatcaactgccaataattttattcaaaaaagatatggaggttgg
agttttgggctgcctttgactaaagaccttcgttttgatataacaacagttcctgctaat
agaacacttgccaaggtatggtatgatccagaaggctatcactcccttccagcttacctc
aacagcttgaataatttcctcctgcgagttaacatgtcaaaatacgatgctgcccgacat
ggtatcatcctgtatagccatccttatccaggagtgcaagaccaagaagaagccacaatg
agaagcttaatcgatattttagtggcactctccatcctgctgggctactctgtcaccact
gccagctttgtcacctatgttgtacgggagcatcagaccaaagccaagcagctgcagcac
atttcaggcattggtgtcacatgctactgggtaacaaacttcatttatgacatggccttc
tatttggtgcctgtagcattttcaattggtgtcattgcaattttcaagttacctgccttc
tacagtgaaaacaacctaagcgctgtatctctcctacttctgttgtttgggtatgccaca
ttttcttggatgtacttgctggctgggctcttccatgaaacaggagtggctttcatcact
tatgtctgcatcaacctcttttttggcatcaattccattgtttccctgtcggtggtgtac
ttcctttccaaggaaaagcctaatgatgcgactttagaacttatttctgaaaccctcaag
cgcattttcctgattttcccgcagttctgttttggctatggtttgattgaactttctcaa
caacagtcagtcctagacttcttaaaagcatatggagtggaatatccaagtgaaaccttt
gagatggataaactaggtgcaatgtttgtggctttggtttctcaaggaaccacgttcttt
ttcttgcgacttttaatcaatgagtggctaataaataaactcagactcttcttcaaaaaa
tttcgttcttcacctgttattgagacaatagttgaagatgaagatgtgtgggctgagagg
tttagagttgagaatggtacaaatgaatatgacctggtccaactccatcgtcttacaaag
acctaccaccttatccacaaaaagattatagctgtaaacaacatcagcattgggatacct
gctggggagtgctttggccttcttggggtgaatggagcaggaaagaccaccatcttcaag
atgctgactggagacataattcctacaggcggaaacatcctgatcagaaataagattggg
tctctggctcacattgactctgacagctctgacggctcattaattggctactgtcctcag
gaagatgctttggatgacctggtaaccgtggaagaacatttgtatttctatgctaggata
catggaattccagaaaaagatattaaagaaactgttcataaactccttaggaggcttcac
ctgatgccctacaaggacaaaactacctctatgtgtagttacggcacaaaaagaaaatta
tccactgcactggccttgatagggaaaccttccatactgttgctggatgagccaagctct
gggatggatcctaaatcaaaacggcacctctggaagatcatttcagaagaagtacagaat
aaatgttccgtcatcctcacttctcacagcatggaagaatgtgaagctctgtgtaccagg
ttggccattatggtgaatggaaggttccaatgtattggatcattgcagcatattaagagc
aggtttggacgaggatttaccgtcaaggttcacgtgaaaaatgccaaagtgagcatggag
cccctcacaaggttcatgcaacttcactttccaaaaacatacttaaaagatcagcacctc
agcatgctagagtatcatgtgccgatcaccgcaggaggagtagcaaacatttttgatctg
ctggaaaccaacaagactgctttaaatatcacaaatttcttagtgagtcagactactctg
gaagaggttttcatcaactttgccaaagaccaaaagtgctatgaaactgccgataccagt
agccaagtttccaccataagcactgactcacaagatgaccagctgtag
DBGET
integrated database retrieval system
