Physeter catodon (sperm whale): 102978367
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Entry
102978367 CDS
T06011
Symbol
SAFB
Name
(RefSeq) scaffold attachment factor B1 isoform X1
KO
K25092
scaffold attachment factor B
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102978367 (SAFB)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102978367 (SAFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102978367
NCBI-ProteinID:
XP_054937247
Ensembl:
ENSPCTG00005010047
UniProt:
A0A9W2WDH8
LinkDB
All DBs
Position
2:complement(20601596..20623354)
Genome browser
AA seq
786 aa
AA seq
DB search
MMDISVLDEAEIDNGSVADCVDDDDADNLPESLSDSRELVEGEMKELPEPLQEHAVEDKE
TINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEEGSELEQPFAQETSS
VGPDRKLAEEEDLFDSAHPEEGDLDLASESTAQAQSSKADTLLAVVKREPVEQTGDGERT
DCEPVGLEKPVEQSSKASEHTEACSEEASEAPPEASSPDPRDSKEDVKKFAFEACNEVPP
APKESSASEGADQKMSSVEEDLDTKRLSKEEKGRSSCGRNFWVSGLSSTTRATDLKNLFS
KYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEKAKNEPA
GKKTSDKREGEGKKEKSSNADRSANLKREEKPDRKDDAKKGEDGSGEKSKDQDDQKPGPS
ERSRTTKSGSRGTERTVVMDKSKGVPVISVKTSGSKDRVSKSQDRKSASREKRSVVSFDK
VKESRKSRDSESRRVRERSEREQCMQAQLEREERKRLLIARERLAFHRHRLERERLERER
LERERMRVEHERRREQERIHHEREELRRQQELRYEQERRPAVRRPYDDGRRDDAYWPEAK
RAALDERYHSDFNRQDRFHDFDHRDRGRYPDHSVDRREGSRSIMGEREGQHYPERHGGPE
RHGRDSRDGWGGYSSDKRMSEGRGLPPPPRGRREWGDHSRRMEDDRAWQGAADGGMMDRD
HRRWQGGERSMSGHSGPGHMMNRGGMSGRGSFAPGGASRGHVIPRGGFGGQNRGSRPNDA
RFTRRY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatcagtgtgttggatgaagcagaaatcgataatggaagtgttgcagattgt
gtggatgacgacgatgctgataatctcccggagtccctgtctgatagtagagagcttgtc
gagggagaaatgaaggagcttcctgagccacttcaagaacatgctgtagaggacaaagaa
actataaacaatttagatacttcatcatctgacttcactatattacaggaaattgaagag
ccatccttggagccagaaaatgagaaaatactcgacattttgggggaaacttgtaaatct
gagccagtaaaagaagaaggttccgagctggagcagccatttgcacaggaaacaagtagc
gtggggccagacagaaagcttgcggaggaagaggacctttttgacagcgcccatccggag
gagggtgatttagatttggccagcgagtcaacagcacaagctcagtcgagcaaggcagac
accctgttagcggtagtgaaaagggagcccgtggagcagacaggcgatggcgagaggacg
gactgtgagcctgtagggctagagaagccagttgagcagagtagtaaagcctcagagcac
acggaagcctgtagcgaggaggcctcggaagcgcccccggaagcctcaagcccagacccc
agggatagcaaagaagacgtgaagaagtttgcttttgaagcttgtaatgaagtccctccg
gctcctaaagagtcctcagccagtgagggcgctgatcagaaaatgagttctgtcgaagaa
gacttggataccaaaaggctttccaaagaggaaaagggtcgtagcagttgtggtaggaat
ttctgggttagtggactttcttctaccaccagagctacagatttgaagaatcttttcagc
aagtatgggaaggtggtgggcgccaaggttgtgaccaatgcccggagtcctggagctcgc
tgctacggctttgttacaatgtccacagcagaagaggccacaaaatgcattaaccacctg
cacaaaacagagctccacgggaagatgatctcggtggaaaaagcaaaaaatgaacctgct
gggaagaaaacttctgacaaaagagaaggggaggggaaaaaagagaagtctagcaatgct
gacagatctgcaaaccttaagagagaagagaagcccgacagaaaagatgatgctaaaaag
ggtgaagatggaagtggagaaaagagcaaagatcaggatgatcagaaacctggcccttca
gaacgatctcgaaccacaaaatcaggaagtcgaggaactgagcggactgtggtgatggat
aaatctaaaggtgtacctgttatcagtgtcaaaacatcaggatccaaagacagagtttcc
aagagccaggatcgcaaatcagccagcagggagaagcggtctgttgtgtcctttgataaa
gtcaaagagtcgaggaagtcacgagactcagagtcccgcagggtgcgcgagcgcagtgag
cgagagcagtgcatgcaggcgcagctggagcgggaggagcgcaagcggctgctcatcgcc
cgtgagaggctggctttccacagacatcgcctggagcgggagcggctggagcgggagcgg
ctggagcgcgagcgcatgcgcgtggagcacgagcgcaggcgcgagcaggagcgcatccac
cacgagcgcgaggagctgcggcgccaacaggagctgcgctacgagcaggagcggcggccc
gccgtgcggaggccctacgacgacgggcggcgagatgatgcttactggccggaagctaaa
cgggctgccctggatgagcgttaccattctgacttcaaccgccaggaccgcttccacgac
tttgaccacagggaccggggccgctaccctgaccactcggtcgacaggagagaaggttca
aggtcaatcatgggagaaagagaaggacagcattaccccgaacgccacggaggaccagag
cgccacggacgggattcccgtgatgggtggggcggatacagctctgacaagaggatgagc
gagggccgggggctgcctcctccccccaggggcagacgtgagtggggggaccacagccga
agaatggaggatgaccgtgcatggcagggcgctgctgacggaggcatgatggacagggac
cataggaggtggcaaggaggtgagagaagtatgtctggtcactccgggccaggtcacatg
atgaaccggggaggcatgtcggggcgcggcagctttgcccctgggggggcctctcggggc
cacgtgatccctcgcggcggcttcgggggccagaaccgggggagccgacccaacgacgcc
cgcttcactcgccgctactaa
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