Physeter macrocephalus (sperm whale): 102978441
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Entry
102978441 CDS
T06011
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcad01001
]
102978441 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102978441 (TRIM28)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102978441 (TRIM28)
Protein kinases [BR:
pcad01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102978441 (TRIM28)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102978441 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-B_box_Trim66
PHD_2
PHD-1st_NSD
zf-RING_2
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
102978441
NCBI-ProteinID:
XP_023972703
Ensembl:
ENSPCTG00005014464
UniProt:
A0A2Y9S2A3
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MAASAAAASAAAAAASGSPGPGEGSAGAEKRAAASSATASASASAAASASASSPAGGGGE
ALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGAVVDC
PVCKQQCFSKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETC
VEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAH
KDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKM
AILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDN
NTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNS
TGPAPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSSDGEV
SGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAVAAGQPGTAP
PGAPGAPPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSGS
TSSGLEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQD
VPGEEWSCSLCHVLPDLKEEDGSLNLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPCR
PLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTED
KADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQDLSSGPGDGP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggcggcggcggcggccgcctccggcagcccgggc
ccgggcgagggctcggcgggcgccgagaagcgcgccgccgcctcctcggccacggcctcg
gcttcggcctcggcggcggcgtccgcatcggcatcgtcgcccgcggggggcggcggcgag
gcgttggaactgctggagcactgcggcgtgtgccgggagcgcctgcggcccgagagggaa
ccgcgcctgctaccctgcctgcactcggcctgcagcgcctgcctcgggcccgcggcgcct
gccgccgccaacagctcgggggacggaggtgcggcgggcgacggcgctgtggtggattgt
ccagtatgtaagcagcagtgtttctccaaagatattgtggagaattatttcatgcgcgac
agtggcagcaaggctgccaccgattcccaggatgcgaatcagtgctgcactagctgtgag
gataatgccccggccaccagttactgtgtggagtgctctgagccgctatgtgagacgtgt
gtggaggcgcaccagcgggtgaagtacaccaaggaccacactgtgcgttccactggacca
gccaagtcgagggacggtgagcgcacggtgtattgcaacgtgcacaagcacgagcccctt
gtgctgttttgcgagagttgcgacaccctcacctgccgggactgccagctcaacgcccac
aaggaccaccagtaccagttcctggaggatgctgtgaggaaccagcgcaagctcctggcc
tcactggtgaagcgcctcggggacaagcatgcgacgttgcagaagaacaccaaggaggtt
cgcagctcgatccgccaggtgtctgacgtacagaagcgcgtgcaggtggacgttaagatg
gccatcctgcagatcatgaaggaactgaacaagcggggccgtgtgctggttaacgacgcc
cagaaggtgactgaggggcagcaggagcgcctggagcgccagcactggaccatgaccaag
atccagaagcaccaggaacacatcctgcgcttcgcctcgtgggctctggaaagcgacaac
aacactgctctgctactctccaagaagctgatctacttccagctgcaccgggccctcaag
atgatcgtggaccccgtggagccacacggtgagatgaagttccagtgggacctcaatgcc
tggaccaagagcgcagaggcctttggcaagatcgtggcagaacgtcctggcaccaactcc
acaggccctgcacccatggcccctcctcgggctccagggcctttgagcaagcagggctct
ggcagcagccagcccatggaggtgcaggaaggctatggcttcgggtcagatgacccttac
tcgagtgcagagccccacgtgtcaggggtgaagcggtcccgctcaagtgatggtgaggtg
agcggcctcatgcgtaaggtgccacgggtgagcctcgaacgcctggacttggatctcacg
gctgacagccagccaccagtcttcaaggtctttccgggcagcaccactgaggattacaac
ctcatcgtcattgagcgaggtgctgcagctgttgctgctggacagcctgggactgcgccc
cccggggcccctggcgccccgcccctgcctggcatggccatcgtcaaggaggaagaaaca
gaggctgccattggagccccgcctgctgccactgagggccccgagaccaaacctgtgttg
atggccctggcggagggccctggcgccgagggcccccgcctggcttcacccagtggcagc
accagctcaggcctggaggtggtggctccagagggcacctcagctccagctggtggccca
ggtgccctggatgacagtgccaccatctgccgtgtctgccagaagccaggtgacctggtc
atgtgcaaccagtgcgaattctgcttccacctggactgtcacctgcctgccctgcaggat
gtgccaggggaggagtggagctgctctctctgccacgtgctacccgacctgaaggaggag
gatggcagcctaaacctggacgggggtgacagcactggtgtggtggccaagctctcgcca
gccaaccagcagaagtgtgagcgcgtcctgctggccctcttctgccatgagccctgccgg
cccctgcaccagctggctactgactctaccttctccctggatcagcccggcggcaccctg
gacttgacgctgattcgagcccgtctccaggagaagttgtcacccccctacagctccccc
caggagtttgcccaggatgtgggccgcatgttcaagcagttcaacaagctgacagaggac
aaggccgacgtgcagtccatcattggcctgcagcgcttctttgagactcgtatgaacgaa
gcctttggtgacaccaagttctccgctgttctggtggagcccccgccgctgagcctgcct
ggtgctggcctgagcgcccaggacctgtccagtggccctggtgatggcccctga
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integrated database retrieval system
