Physeter macrocephalus (sperm whale): 102978625
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Entry
102978625 CDS
T06011
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X2
KO
K12200
programmed cell death 6-interacting protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03250
Viral life cycle - HIV-1
pcad03272
Virion - Hepatitis viruses
pcad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102978625 (PDCD6IP)
03272 Virion - Hepatitis viruses
102978625 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102978625 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102978625 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102978625 (PDCD6IP)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
102978625 (PDCD6IP)
Exosome [BR:
pcad04147
]
Exosomal proteins
Proteins found in most exosomes
102978625 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Ly49
CCDC93_N
Motif
Other DBs
NCBI-GeneID:
102978625
NCBI-ProteinID:
XP_023972300
Ensembl:
ENSPCTG00005006462
UniProt:
A0A2Y9S7V4
LinkDB
All DBs
Position
18:complement(54909249..54972888)
Genome browser
AA seq
868 aa
AA seq
DB search
MATFVSVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKE
VFPVLAAKHCIMQAYAEYHQSILAKRQKKFGEEIARLQHAAELIKTVASRYDEYVNVKEF
SDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVSVPISQKFTDLFEKMVP
VSVQQSLAACGQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDISGDTVPQSILTK
STSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEETTDNDLRAKFKERWQRTP
SNELYKPLRAEGSNFRTVLDKAVQADGQVKERYQAHRDTIALLCKPELELNAAIPSANPA
KTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEAIS
VTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNDANLREEVLKNLAAAY
DNFVELVANLKEGTKFYNELTEILIRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SIPTPAYQSSPAGGHTPTPPTPAPRTMPPTKPQPPARPPPPVLPANRTPPAPAPAPASTG
TTAPAPSQTPGSAPPLQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQS
PGQAPYPGPQQPSYPFPQPPQQPYYPQQ
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcgtctcagtgcagctgaagaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcgccgcgccgcgctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatactatgatcagatctgttccattgaaccc
aaattcccattttctgaaaatcagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatctgtaaaattggctcttgcaagcctaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcggaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattatcagtttgctagtggtgccttt
ttgcatattaaagagacggttttatctgccttgaatagagagcctactgtggacatatct
ccagataccgttgggactctcagtcttatcatgctggcacaggcccaagaagtatttttt
ttaaaagccacgagagataaaatgaaagatgctatcatagctaaattggctaatcaggcg
gcagattattttggtgatgcttttaaacagtgtcagtacaaagatactctccctaaggag
gtgttccctgtcttggctgcaaagcactgtatcatgcaggcctatgctgagtaccaccag
tctatcctggcaaaacggcagaagaaatttggagaagagattgcaaggttacagcatgca
gcagaattgattaaaacagtggcatctcgctatgatgaatatgtcaacgtgaaggaattt
tctgacaaaatcaaccgtgcccttactgcagcaaagaaggataatgatttcatttatcat
gatcgagttccagaccttaaagatctagaccctattggcaaagccacacttgtgaaatct
acgccagtcagtgtacccatcagccagaaattcactgatctgtttgagaagatggttcct
gtgtcagtgcagcagtctttggctgcctgtggtcagaggaaagctgatttagttaacaga
tcaattgctcaaatgagagaagccaccactttggcaaatggggtgttagcttcacttaat
cttccagcagcaattgaagatatatctggagatactgtacctcagtctatactgactaag
tccacatctgtgattgaacagggaggcatccagactgttgatcagttgatcaaagagcta
cctgaacttctacaaagaaacagagaaatcctagatgagtcattaagactgttggatgaa
gaagaaacaactgacaatgatttaagagcaaaattcaaggaacgctggcaaaggacacca
tccaatgaactctataagcccttaagagcagagggaagcaacttcagaactgttttggat
aaagctgtgcaagcagatggacaggtgaaagagcgttaccaggctcaccgggacaccatt
gcacttctgtgtaagccggagctggagctgaatgctgccatcccatctgctaacccagcg
aagaccatgcagggcagcgaggttgtaaatgtcttaaaatccttactgacaaatcttgat
gaagtaaagaaggaaagagaggggctggagaatgacctgaaatcagtgaattttgacatg
acaagcaaatttttgactgctctggctcaagatggtgtgataaatgaagaagctatttct
gttactgaactggatcgaatctatgggggtcttacaactaaagtccaagaatctctaaag
aaacaagaaggacttcttaaaaatattcaggtctcacaccaggaattttcaaaaatgaaa
cagtctaacaatgacgctaatttaagagaagaagttttgaagaatttagctgctgcatat
gacaactttgttgaacttgtagctaatttgaaggagggcacaaagttttacaatgagctg
actgaaatactcatcaggttccagaacaaatgcagtgatatagtgtttgcacggaagaca
gagagggatgaactcttaaaggacttgcaacaaagcattgccagagaacctagtgctcct
tcaattcctacacctgcgtatcagtcctctccagcagggggacacacgccaacgcctcca
actccagcgccaagaaccatgccgcctactaagccccagcccccagcccggcctccacct
cctgtgcttccagcaaatcgaactcctccagctccagctccagctccagcgagcactggg
accactgcaccagctccatcacagactcctggttcagctccccctctgcaggcccaggga
cccccataccccacctatccagggtatcccgggtattgccaaatgcccatgcccatgggc
tataatccttacgcgtacggccagtataatatgccatatccaccagtgtatcaccagagc
cctggacaggctccgtacccaggaccccagcagccttcataccccttccctcagccccca
cagcagccttactatccacagcagtag
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integrated database retrieval system
