Physeter macrocephalus (sperm whale): 102979012
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Entry
102979012 CDS
T06011
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X6
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102979012 (LRBA)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Others
Others
102979012 (LRBA)
Endosome - Golgi transport
102979012 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102979012 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_Vps41
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
102979012
NCBI-ProteinID:
XP_023982442
Ensembl:
ENSPCTG00005002441
UniProt:
A0A2Y9SYP4
LinkDB
All DBs
Position
7:complement(32298420..33112329)
Genome browser
AA seq
2856 aa
AA seq
DB search
MASEDSIAPSPPPTGDDGGGGGKGEETPAEGGALSLKPGLPIRGIRMKFAVLTGLIEVGE
VSNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILK
KSIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSVKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLVEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDEVDLTICSTLLAFIMELLKNSVAMQEQMLACKGFLVIGYSLEKSSKSH
VSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFI
GTVNIYNAIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEMLSLRAFLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GLRVIYKLMASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLTERLMLQTNLI
TMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREHQGKVDEEIGQCSSSPIQAVS
GTSRDVNVSVGSQQLDTKDSPPSSHITRTSDEKSSIGKTSSVESASNVELQTHNTSNEER
TTVQENQGLLDEVPLEETLINETINSESLEGSSDIIEAVTVSSDSFKTTGKDIMTVNEVT
ASISSPSEEDVSEVPELLDKSVVEEEEDDDYVELKVESIPTEEASLPTELQDNSLSPAAS
EASERMDMFSNDHKLIFQEEEPVSKKQTDTETRDPKDSAVLTMTASGSSATSPGTTASQT
TVQSDVGQMLEVGEKTNLTGETKLHSDSNSSIFESPTTSEQKIAKLDVSSVATDTERLEL
KATTNMEASQRHQPVLEMSRQQEQPGQGTAPDAVNGQRRDSRSMFRIPEFKWSQVHQRLL
TDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLL
SAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGI
LRQCLRMVCAVAVRNCLECQQHSQLKTKGKAGKVQKTAHSLIPMGKSAAKSPVDIVTGGI
SPVRDFDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNE
RHSQSFKETGSESGNLSLPDIENSPAAFSPLTPASVEESESASSARRRDSGIGEEMATGL
GSNVDVAPPVAPPSVSAGPDAISEVLCTLSSEVSKSQETKSDGENELDNKAAPSVPVSKN
INVKDILRSLVNIPGDGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIVATKKSAV
LPSTLTSIPTNAVSVVSSVDSAQASDVGGESPGGRSSNAKLPAVPTVGSVSQDQVSNMSI
TERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVML
LCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAE
FESLCAQYSADRREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRP
REFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSKALGN
QNSENEILLEGDDDTLSSVDEKDLENLTGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFE
VDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAIMFNF
PDPATVKKVVNYLPRVGIGTSFGLLQTRRISLASPRQLFKASNMTQRWQHREISNFEYLM
FLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAER
YESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTSFLNLQGGKFDHADRTFSSISRAW
RNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRIN
RLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLREAV
EAQIRSFGQTPSQLLLEPHPPRGSAMQASPLMFTDQAQQDVIMVLKFPSNSPVTHVAANT
QPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPCQLPVEIDPLIASNTGMHRRQIT
DLLDQSIQVHSQCFVITSDNRYVLLCGFWDKSFRVYSADTGKLIQVVFGHWDVVTCLTRS
ESYIGGNCYILSGSRDATLLLWYWNGKSSGIGDNPGSETTTPRAILTGHDSEITCAVVCA
ELGLVLSGSKGGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGFFCTFS
VNGKLQATMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKQLFAYPGCDAGIRAM
ALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8571 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaagacagtattgccccttccccgccaccaacaggtgatgacgggggaggt
ggaggaaaaggagaagaaacccctgccgaagggggtgccttgtctctgaaaccagggctc
cctatcaggggcatcagaatgaaatttgccgtgttgacggggttgattgaagtcggagaa
gtatccaatagggatattgtagaaactgtctttaacctgttggtaggagggcaatttgat
ttagaaatgaatttcattattcaagaaggtgagagtatcatctgcatggtggacctatta
gagaaatgtgatgttacttgccaagcagaagtctggagcatgtttacagccattctgaag
aaaagcatacgaaatcttcaggtctgcactgaagtaggccttgttgagaaagtgcttggg
aaaattgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctg
gctagctacaatttgacagttcgagaactaaagctgttcttcagtaaacttcaaggagat
aaaggacaatggcctccacatgctggaaagttgctgtctgtgttaaagcacatgccacag
aagtatggtcccgatgcctttttcaactttccaggaaagagtgctgcagctattgcatta
cctcctatagccaaatggccataccagaatggttttacatttcatacctggcttagaatg
gatcctgtaaataacatcaatgtggataaagataaaccatatttgtattgtttcagaacc
agcaaaggtcttggttattctgcacactttgttgggggatgtttaattataacatcagta
aagtcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccccaaaagtgg
tatatggtaactatagtgcacatttataaccggtggaagaacagtgagcttcgatgttat
gtgaatggtgagcttgcttcctatggagagataacatggtttgtcaacaccagtgatacc
tttgacaagtgtttcctgggctcatcagaaacagcagatgctaatagggtattctgtggt
cagatgactgcagtttacctttttagtgaagctcttaatgcagctcagatttttgctatt
tatcagttgggcctgggatacaagggtacatttaaatttaaagcagaaagtgacctgttc
cttgttgagcatcacaaacttttattgtatgatggcaaactctctagtgccattgcattc
acatacaatccacgcgccacagatgcccagctctgccttgaatcatcccctaaggacaac
ccttcaatttttgttcattcaccgcatgcactcatgctccaggatgtgaaggcggtttta
acacattccatccaaagtgccatgcattcaattggaggagtacaagtgctgtttccactt
tttgcacagttggattataggcaatatttatctgatgaagttgacttgactatatgttca
actttgctggcttttatcatggagttgttgaagaactcagttgctatgcaagagcagatg
cttgcctgcaagggatttttggtaataggatatagtcttgaaaagtcttccaaatcccat
gtcagcagagcagtacttgaactttgccttgcattttcaaaatatctgagtaatctgcag
aatgggatgcccctactcaagcaattgtgtgatcacattcttcttaacccagctatatgg
attcataccccagccaaggttcagttgacactctatacttatctgtccacggaattcatt
ggtacagtcaacatatataatgccattcggagagttggaacagtgcttctcatcatgcat
acactgaagtactactattgggcagtgaatcctcaggatcggagtggtatcaccccaaaa
ggattagatggaccacgacctaatcaaaaagaaatgctttctctacgagcgttcttgttg
atgttcataaagcaattggtgatgaaggattctggagtaaaggaagatgagctacaggcc
attcttaattatctactcactatgcatgaggatgacaatctaatggatgtcctacagctg
cttgttgcattaatgtcagaacatcctaattctatgatacctgcttttgaccaaaggaat
gggttacgagttatctataaacttatggcatcaaaaagtgaaggaatcagagtacaagct
ctcaaggcaatgggctattttttaaaacacctcgctccaaaaagaaaagctgaagtcatg
cttggacatggattgttttcattgctaactgaaagactcatgcttcagacaaatttaatc
acaatgaccacatataatgtcctgtttgagattcttatagaacagatttgtactcaggtg
atacataaacagcatccagatcctgattcttcagttaagatacaaaatcctcagatacta
aaagtaattgcaaccctacttcgaaattctccccagtgcccagagagcatggaagttcgc
agagcctttctttctgacatgattaaactttttaataacagcagagaaaatagaaggagc
ttgctacagtgttctgtgtggcaagagtggatgctttctctctgctattttaatcctaag
aattcagatgagcaaaagataacagaaatggtatatgccatattccgaatcctactttac
catgcaatcaaatatgagtggggtggctggcgtgtgtgggtagacaccttatcaatcaca
cattcaaaggtcacttttgaaatacataaagaaaaccttgccaatatatttagggaacac
cagggaaaagttgatgaagaaatagggcagtgttcttcaagtccaattcaagcagtctct
ggcactagcagggatgttaatgtttcagtaggatcccagcaattggatacaaaggattct
cctccttcttctcatatcaccagaactagtgatgaaaagtcaagcattgggaagacaagt
tcagtagaatctgcatccaatgttgaactgcaaactcacaatacatctaatgaagaaagg
acaactgtgcaagaaaatcaggggttactggatgaagtccctttagaagaaacactgata
aatgaaacaattaattcagagagtttagaaggatcttctgacataatagaagctgtgact
gtttcctctgattcttttaaaacaactggcaaagatataatgactgtcaatgaagtaact
gcttccataagttctccttcagaagaggacgtttcagaggtgccagaattattggataag
tctgtagtagaggaagaagaagatgatgattatgtagaactgaaggtagaaagtattcct
actgaggaagccagtctacctacagagctccaagataacagtttgtctccagctgcttct
gaagccagtgaaagaatggacatgtttagtaatgaccacaagttaatatttcaagaggaa
gaacctgtaagtaagaaacaaactgacactgaaactcgagatcctaaagattctgcagtc
ttgactatgacagcatcagggtcttcagctacctcaccaggaactactgcttcccaaaca
actgttcaatcagatgttggtcagatgctggaggtaggggagaagactaacctcaccgga
gaaaccaaactacatagtgattctaatagtagtatctttgagtctcctactacttctgag
cagaagattgctaagttggatgtttccagtgttgctacagatactgagagattggaattg
aaggccactacaaacatggaagcatctcagcgtcatcagcctgtgcttgagatgtcaagg
caacaggagcagccagggcaaggaacagcaccagatgcagttaatggacaaaggagggat
tccaggtctatgttccgtattccagagttcaaatggtctcaagtgcatcagcgtttgctc
actgatctattattttcaatagaaacagacatacagatgtggagaagccattcaacaaag
acagtaatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcat
ctcatctctcaagtgatggacaatatggtcatggcttgcgggggtatactgccattgctt
tcagctgctacgtcggctacacatgagctggagaatattgaacctactcaaggcctttca
atagaagcctctgtgacatttttgcagagactaatcagccttgtggatgttcttatattt
gcaagttctcttggctttactgaaattgaagctgaaaaaaatatgtcatctggaggaatt
ctgcggcaatgtctccgaatggtgtgtgcagtggcagtaaggaattgcttagagtgtcag
cagcattcacagctgaaaactaaaggcaaagcaggaaaagtccagaaaacagcacacagc
ctgattcccatggggaaatctgcagcaaagagtccagtggatattgtaactggtggtata
tctccagtaagagattttgacaggctcctacaagacatggatattaatcgacttagggca
gttgtcttcagagacatagaggatagcaaacaagcacagtttttagccttggcagttgta
tactttatctctgttcttatggtctcgaagtacagagacattttggaaccccaaaatgaa
aggcatagccagtcttttaaggaaactggtagtgaaagcgggaatttatcactccctgat
atagaaaactcaccagcagcattcagtccattaactccagcatccgtggaagaatctgaa
agtgcatcatctgctcgaaggagggactcaggcattggggaagaaatggctactggttta
ggaagcaatgtggacgtagctcctcctgtagcacctccaagtgtcagtgcaggcccagat
gccatcagtgaggtgctgtgcactctttcttcagaagtcagtaaatctcaggaaaccaaa
agcgatggagaaaatgaattggataacaaggctgcaccatcagttccagtttccaaaaat
atcaatgtgaaggacattctccgaagcttggttaacataccaggagatggagtcacggtg
gatcctgcccttctgccaccagcctgccttggagctcttggtgatctatctgttgagcaa
cctgtgcagttcagatcttttgacagaagtgtcatcgtggcaacaaaaaaatcagcagtc
ttaccttccacacttacaagtatacctaccaatgctgtcagtgtggtttcttcagtagat
tcagcccaagcctcagatgtggggggagaatcacctggtggtagatcatctaatgcaaaa
ttacccgcagttccaacagttggttcagtttcacaagaccaagtttcaaatatgagtatt
acagagaggcttgaacatgctttggaaaaggcagctcctcttctacgagagatatttgta
gattttgcaccttttctttctcggacacttttgggtagccatggacaagaactgcttata
gaaggaacaagtctggtttgcatgaagtctagtagttcagttgtggaattggttatgcta
ctgtgttctcaggagtggcagaattctattcagaagaatgcaggccttgcttttattgaa
cttgtcaacgaaggaaggttgcttagccaaactatgaaggatcacctagtaagagtagca
aatgaagctgaatttatcctgagcaggcagcgagcagaagatattcacagacatgcggaa
tttgagtcactgtgtgcccagtattcagcagacagacgagaagatgagaagatgtgtgat
catttgataagagcagccaaatatcgagaccatgtgacagcaactcagctaatccagaaa
attatcaacattctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcct
cgtgagttctggcgcctcgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacacgct
gcagatgaagatattcttgctaaaggaaaacagtccatcaagagtaaggctttaggaaat
cagaactcggaaaacgagatcctcctggaaggcgacgacgatactctgtcatccgtggac
gagaaagatttagagaatctcaccggtcctgttagcctgagcacaccagctcagcttgtg
gccccctctgttgtagtaaagggcactctttctgtcacctcctccgaactctattttgag
gtggatgaagaagaccctaacttcaagaaaattgaccccaagatcctggcatatacagaa
gggctgcatggaaaatggctgttcacagagatacgatcgatcttttctcgtcgttatctt
ttgcaaaatacagccctggagatctttatggcaaacagagttgctataatgttcaacttc
ccagaccctgcaacagtaaagaaagtggttaactatctacctcgtgttggtattggaacc
agttttggattgcttcaaaccaggcgtatctcattagctagtcctcgtcaactttttaaa
gcttctaatatgacccagcgatggcaacacagggagatttcaaattttgagtacttgatg
tttctcaacacaatagcaggacggagttacaatgacttaaatcagtacccagtgtttccc
tgggtcattactaattatgaatcagaagaactggatcttactttgccaagtaacttcaga
gatttgtccaagccaataggagctttgaatccaaaaagagcagcattctttgcagagcgt
tatgaatcctgggaagacgatcaagttccaaagttccactatggcactcattactcaact
gcaagttttgttcttgcatggctgctaagaatagaacccttcacaacttctttcctaaat
ttacaaggagggaaatttgatcatgcagatagaactttttcatcaatttccagagcttgg
cgaaacagtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctc
cctgagatgtttgtcaacttcaataattataatcttggagtgatggatgatgggacagta
gtgtctgatgttgaacttcctccttgggccaaaacctcagaagaatttgttcgcataaac
agattggctctggagagtgaatttgtttcctgccagcttcaccaatggattgatctcatt
tttggctataaacagcaagggccggaggctgttcgagccctcaatgtgttctattacctg
acctatgaaggagctgtcaatctgaattcaataactgatcctgtattgagagaggctgtc
gaagctcaaatccgaagttttgggcagacgccttctcagctcctcctagagccccatcct
cccagaggttccgccatgcaagcgagtccattgatgttcacagaccaagctcagcaggat
gttatcatggttctaaagttcccctccaactcccctgtcactcacgtggcggccaacacc
cagcctgggttggcaactcctgctgtgatcacggtcaccgctaacaggctgtttgccgtg
aacaagtggcacaaccttccggctcatcaaggtgctgtacaagaccagccatgccagctg
ccagtggaaatcgatcctctcatagccagcaatacaggaatgcacaggaggcaaatcact
gaccttttagaccaaagtattcaagtgcattcccagtgctttgtcatcacttcggacaac
cgctacgttctcctctgtggcttctgggataagagttttcgcgtctactctgcagacaca
ggaaaattgatccaagtggtgtttggccattgggacgttgtcacttgcctcactcgttcg
gagtcatatattgggggaaattgctacattctctcagggtcacgtgatgcaacccttctg
ctctggtactggaacggaaaaagcagtgggattggcgataacccaggcagtgagaccacc
actcctcgggccatcttgacaggccatgactctgagatcacttgtgctgtcgtctgcgct
gagcttggccttgtgttaagcggttctaaaggaggaccatgtctcatacattccatgaat
ggagacttgttaaggactttggagggtcctgaaaactgcctgaaaccaaaactcattcag
gcttccagagagggtcactgtgtcatattctatgaaaatggcttcttctgtacattcagt
gtgaatggaaaactccaggccaccatggaaacagatgataacataagggctatccagctg
agccgggacgggcagtacctgctcaccggaggagacaacggtgtggtcatggtctggcag
gtgtctgacctcaagcagctcttcgcctatccaggctgcgacgccgggatccgggccatg
gcactatcttacgaccagaggtgcatcatttctggcatggcctcaggaagcattgttctg
ttctacaatgactttaaccgctggcatcatgaataccaaacccgctactga
DBGET
integrated database retrieval system
