Physeter macrocephalus (sperm whale): 102979052
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Entry
102979052 CDS
T06011
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcad01009
]
102979052
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102979052
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102979052
Protein phosphatases and associated proteins [BR:
pcad01009
]
HAD phosphatases
Fcp/Scp phosphatases
102979052
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102979052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
FtsH_ext
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
102979052
NCBI-ProteinID:
XP_054939878
UniProt:
A0A9W2WLG6
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All DBs
Position
4:complement(102715384..102791627)
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AA seq
499 aa
AA seq
DB search
MFMKNELEEKNNLLVLKCSFQCFCSNFCYKASKFFEAQIPKTPVWVREEERRPDFQLLQE
GQSGHSGEEIQLCSKAIKTSDVDSPGHFEKHDESSSSGTHSDSSSDNEQDFVSSILQGNR
PNATGIRPQLYKKSIMKKKAGQKVNSKHESKEQTVIDVTEQLGNCRLDSEEKAAACELPL
RNVNTQISSNTSPQEKVEASKISENKYSSSKITLVGISKKSAEHFKRKFAKSNQVSRSAS
SSVQLCPEVAKANLLKALKETFIEWKTEETLRFLYGQNYASVCLKPSSAPLVKEEELDED
DVNCDPDSYSPALQESQNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIREFYRGR
YVLNEETTKSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLGPLQITLGDIYT
QLKNLVQTFRLTNRNIIHKPAEWTLIALVLLSLLTSILGIQKHSQENVTFTQFLTTLLEE
LHLKNEDLESLTIIFRTSC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaagaacgagcttgaagaaaaaaataatttgctggttttaaaatgttctttt
cagtgtttttgcagcaatttttgttataaagcatctaagtttttcgaagcacaaattcct
aaaactccagtgtgggttcgagaagaagaaagacgtcctgattttcagctgctacaggaa
ggacaaagtggtcattctggagaagaaatacagttatgcagtaaggccattaaaacatca
gatgttgacagtccgggccattttgagaagcatgatgaatctagttcttctggcactcat
agtgatagtagcagtgataatgagcaagactttgtttcctccattctacaaggaaacaga
ccaaatgcaaccggtataaggccacagctgtacaaaaaaagcataatgaaaaagaaagct
ggtcaaaaggttaactccaaacatgaaagcaaagaacagacagtaatagatgtcactgag
cagttaggcaattgcagattagatagtgaggaaaaagctgcggcttgtgaacttccgtta
cggaatgtaaatactcagatttcttcaaatacgtctccgcaagaaaaagtagaagcttca
aaaatttctgaaaataaatacagtagttcaaaaataactcttgtaggcataagtaagaaa
agtgctgagcattttaagaggaaatttgccaaatcgaaccaagtttctaggtcagcttct
agttcagtgcagctgtgccctgaagttgcaaaggcaaacttacttaaagccctgaaggag
acttttattgagtggaagacagaagaaactttgaggtttttatatggccagaattatgct
tctgtatgtctgaaaccctcttcagcccctctggttaaggaagaagaacttgatgaagat
gatgtgaactgtgacccagacagttattcccctgccttgcaggaatctcagaacagcttg
gatgagtctttaccatttagagcctcagatacagccattaaaccactgccaagttatgag
aacttgaaaaaagaaactgaaacattaaatctaaggatcagggagttttatagaggacga
tatgttttgaatgaagaaaccaccaaatcacaagactcggaagagcatgatcccaccttt
ccactgatagattcaagttctcagaaccagattagaaaacgcatcgtacttgaaaaattg
agtaaagtattgcctggacttttggggcctcttcagattacattaggagatatttacaca
caacttaaaaatcttgtccaaactttcagattaacaaacaggaatattatacataagcct
gcagagtggaccttaattgctttggtgttgctgtcattactgacctcaattcttggcatt
cagaagcattctcaggaaaatgtaacgtttacacagtttttgaccaccctgcttgaagaa
ttacacttaaagaatgaagaccttgaaagtttaaccatcatatttagaaccagctgttaa
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