Physeter macrocephalus (sperm whale): 102979162
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Entry
102979162 CDS
T06011
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102979162 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102979162 (MID1)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102979162 (MID1)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102979162 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
TRIM_CC
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102979162
NCBI-ProteinID:
XP_023971220
Ensembl:
ENSPCTG00005012468
UniProt:
A0A2Y9RXG0
LinkDB
All DBs
Position
7:complement(153778840..154449144)
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AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERPFDANSMTSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDIAFSQPVCPTFTVWNKCLTIITGLPIPDHL
DCPEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
ctcctgctcccctgcgcacacagcctctgcttcaactgcgcccaccgcatcctggtgtca
cactgcgccaccaacgagtccgtggagtccatcaccgccttccagtgccccacctgccga
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggttccagaaagcttcggtgagcgggcccaattcccccagcgagacc
cgccgggagcggccgttcgacgccaacagcatgacttcggccgagaaagtcctctgccag
ttctgtgaccaggatcctgcccaagacgccgtgaagacctgtgtcacttgtgaagtgtcc
tactgtgacgagtgcctgaaggccactcacccgaataagaagccctttacaggccaccgt
ctgattgagcccatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgcgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gtcgggcggcaccgagatcatcaggtggcggctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaacctcaccaaccttattaagaggaacacggaactggagacgctc
ttggctaaactcatccagacatgtcaacatgtggaggtcaatgcatcacgtcaagaagcc
aaattgatggaggagtgtgatcttcttattgagatcattcagcaaagacgacaaattatt
ggaaccaagatcaaagaagggaaggtgatgaggcttcgcaaactggctcagcagattgca
aactgcaaacagtgcattgagcggtcggcgtcactcatctcccaagcggaacactctctg
aaggagaatgatcacgcgcgtttcctacagaccgcgaagaacatcactgagagagtctcc
atggcaacggcatcatcccaggtgctaattcctgaaatcaacctcaacgacacatttgac
acctttgccttggatttttcccgagagaagaaattgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcacc
gttcactggacctccgacgacgaattcagcgtggtctcctacgagctccagtacaccata
ttcaccggacaagccaatgttgtgagtctgtgtaactcggccgatagctggatgatcgtg
cccaacatcaagcagaaccactacaccgtccacggtctgcagagcggcaccaagtacatc
ttcattgtcaaggccatcaaccaggcgggcagccgcagcagtgagcctgggaagctgaag
acaaacagccaaccatttaaactggaccccaaatctgcacatcgcaagctaaaggtgtcc
catgataacttgacagtagaacgtgatgagtcatcatccaaaaagagccacacgcctgaa
cgcttcaccagccaaggcagctatggcgtagctggaaacgtgttcattgacagtggccgg
cattactgggaagtggtcataagcggaagcacatggtatgccatcggcctcgcttacaaa
tcagccccgaagcatgagtggattggcaagaactctgcttcgtgggcgctgtgccgctgc
cacaatacctgggtggtgagacacaacagcaaggagatccccatcgagccagccccccac
ctccggcgcgtcggcatcctgctggactacgataacggctccatcgctttctacgatgcc
ttgaactccatccacctctacactttcgacatcgcattctcgcagcctgtgtgccccacc
ttcactgtgtggaacaaatgtctgaccatcataaccggcctgcccatcccagaccatctg
gactgtccagagcagctgccgtga
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