Physeter macrocephalus (sperm whale): 102979368
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Entry
102979368 CDS
T06011
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03020
RNA polymerase
pcad04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102979368 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102979368 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102979368 (POLR3A)
Enzymes [BR:
pcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102979368 (POLR3A)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102979368 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102979368
NCBI-ProteinID:
XP_054936866
Ensembl:
ENSPCTG00005005766
UniProt:
A0A9W2WC95
LinkDB
All DBs
Position
20:complement(28985529..29053660)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNTCHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMTGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQSEPALSKNELLLTAESITKKNEFLC
CQDSFLQEIKKFVKEVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPSPPRRPLIFD
TNEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggatgtggccaagaaaataagccacatctgtttt
ggaatgaagtcagctgaggagatgcgccagcaggctcacatccaggttgtgagtaagaac
ctgtatagccaggacaacaaccatgccccactgctatacggggtgcttgaccacaggatg
ggtacgagtgagaaggaccgtccttgtgaaacctgtgggaagaacttggctgactgtctg
ggccactacgggtacattgacttggaattgccatgttttcatgtggggtacttccgagca
gtcataggcatcttacagatgatctgtaaaacctgctgccacatcatgctgtcccaggag
gagaagaagcagtttctggattatctaaagaggcccggcctgacttacctccagaagcga
gggctgaagaagaaaatctctgataaatgcaggaagaagaacacgtgccatcattgtggc
gcctttaatggtactgtaaagaaatgtgggttgctgaagataatccatgagaaatacaag
accaacaagaaagtggtggatcctatcgtgtcaaatttccttcagtccttcgaaactgcc
atcgagcataacaaagaagtagagcctctactggggagggcacaggaaaacttgaatccc
ttagtagttctgaatttatttaaacgaatcccagctgaagatgtccctctacttctgatg
aatccagaagctggaaagccctccgatttgattctcacacgacttttagtgccccctctg
tgtattagaccctctgtcgtgagcgatttgaagtctggcaccaatgaagatgatctgacg
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcggatatcagga
gctaagacccagatgatcatggaagactgggatttcctgcagctgcagtgcgccctctac
attaacagtgagctctcaggcattcccctcaacatggcacccaagaaatggaccagaggg
ttcgtccagcgcctgaagggaaaacagggtcgatttagaggcaatctctcaggaaaaaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccgaattgatgaggta
gctgtgccagttcacgtggccaaaattctaacttttcctgagaaggtgaacaaggcaaac
atcaactttttgaggaagctggttcgaaatggccctgaagttcacccaggagccaatttc
attcagcagagacacatgcagatgaaaaggtttttgaaatacggaaacagagaaaagatg
gctcaggagctcaagtttggggacattgtggagagacacctcatagatggagacgtggtt
ctgttcaatcggcagccttcgctgcacaaattgagcattatggcacatctggccagggtc
aaaccccaccgcaccttcagatttaatgagtgtgtctgtacaccctacaacgcggatttt
gatggtgacgaaatgaaccttcatcttcctcaaacagaagaagctaaagcagaagccctt
gttctcatggggactaaagcaaatcttgtaaccccaaggaatggagaaccactaattgct
gctattcaggattttctgacaggtgcctatctcctcactcttaaggacactttctttgac
cgagctaaggcttgccagatcattgcttcaatattggtgggcaaggatgagaaaattaaa
gttcgcctcccaccccctacaatattaaagcctgtcaccctgtggacgggaaagcagatc
ttcagcgtcatcctcagacccagcgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaaaggagaagacctctgtgtcaatgattcctacgtcactatc
cagaacagcgagctcatgaccggcagcatggacaaaggaacgctgggatcgggatccaag
aacaatattttttacattttgctgcgagactgggggcagaacgaagctgccgatgcgatg
tcacggctcgccaggctggcccccgtctacctgtctaaccgtggattctcaattgggatt
ggtgacgtcacacctggccaaggactgctgaaggccaagtatgagttgctgaatgctggc
tacaaaaaatgtgatgagtacattgaagccctgaacacaggcaagctgcagcagcagcct
ggctgcactgctgaggagaccctggaggctttgatcctgaaggagctgtccgtgatccgc
gaccacgcaggcagcgcctgcctccgggagctggataagagcaacagccccctcaccatg
gctctgtgcggctctaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagccatcagtggctctcgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctcccagctgccaaaggttttgtggctaacagcttttattca
ggtttgacaccaaccgagtttttcttccacacaatggctggccgagaaggtctggttgac
acagccgtgaagacagctgaaacaggatacatgcagaggaggctcgtaaagtcccttgaa
gatctttgctcacagtatgatttgacagtccgaagctctacaggcgatatcatccagttc
atttatgggggagatggcttagatcctgcagccatggagggaaaagatgaacccttggag
tttaaaagagttctggacaacatcaaagccgtcttcccatgccagagcgagcctgctctc
agtaagaatgagcttctcctgaccgctgagtccatcacgaagaagaatgagtttctctgc
tgccaggacagcttcctgcaggagataaaaaaattcgttaaggaggtttctgagaagatc
aagaaaacccgagataaatatggcatcaacgataacggcacaacagagccccgggtgctg
taccagttggaccggatcacccccacccaaatagaaaagtttctggagacgtgtagggac
aagtacatgagggcacagatggagccaggttctgccgtgggtgcactctgtgcccagagc
attggcgagccgggcacccagatgaccctgaagactttccacttcgcgggcgtggcctcc
atgaacatcaccctgggtgtgccccgcatcaaagagatcatcaacgcctccaaggccatc
agcactccaatcatcacagcacagctggataaggacgacgatgcagattacgctcgcctc
gtgaaagggagaattgagaaaaccctcttgggagagatttcagagtatattgaagaagtg
tttcttcctgacgattgctttattctcgtcaagctctccctggaacggatcagacttctg
aggctggaagtgaacgctgagacggtgaggtattccatctgcatgtccaagctccgcgtg
aagcctggcgacgtggccgtgcatggtgaggctgtggtgtgtgtcaccccccgagagaac
agcaagagctccatgtactacgtgctgcagtttctgaaagaggatctccccaaggtggtg
gtgcagggcatcccggaggtgtcccgagctgtcatccacatcgacgagcagagcggaaag
gagaagtacaagctcctggtggagggtgataacctgcgggcagtcatggccacccacggt
gtgaagggcacccgaaccacctctaacaacacatacgaggtggagaaaaccctgggcatc
gaagctgcccggacgaccatcatcaacgaaatccagtacacgatggtcaaccacggcatg
agcatcgaccggcggcacgtgatgctgctctccgacctcatgacctacaagggtgaagtc
ctgggcattaccaggtttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagacagccgaccacctctttgacgccgcctacttcgggcaaaaggactccgtg
tgtggggtgtctgaatgcatcatcatgggcatccccatgaacattggaaccgggctcttc
aagctgctccacaaggctgacagggacccaagccctcccaggaggcccctgatcttcgac
acaaacgagttccacatcccccttgtcacatag
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integrated database retrieval system
