KEGG   Physeter macrocephalus (sperm whale): 102979387
Entry
102979387         CDS       T06011                                 
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03013  Nucleocytoplasmic transport
pcad03015  mRNA surveillance pathway
pcad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102979387
  09122 Translation
   03013 Nucleocytoplasmic transport
    102979387
   03015 mRNA surveillance pathway
    102979387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102979387
   03041 Spliceosome [BR:pcad03041]
    102979387
   03009 Ribosome biogenesis [BR:pcad03009]
    102979387
   03012 Translation factors [BR:pcad03012]
    102979387
Enzymes [BR:pcad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102979387
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102979387
   mRNA cycle factors
    Stress granule specific factors
     102979387
Spliceosome [BR:pcad03041]
 Complex C
  Other components
   EJC/TREX
    102979387
Ribosome biogenesis [BR:pcad03009]
 Eukaryotic type
  90S particles
   Helicases
    102979387
Translation factors [BR:pcad03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    102979387
SSDB
Motif
Pfam: Helicase_C DEAD Cas3-like_C_2
Other DBs
NCBI-GeneID: 102979387
NCBI-ProteinID: XP_028355253
Ensembl: ENSPCTG00005022234
UniProt: A0A455C5T6
LinkDB
Position
14:123809358..123817563
AA seq 242 aa
MIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT
NKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRK
VDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI
INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVAD
LI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgattcgtcgcagaagtttgaggacacgtgctatcaagatgttggttttggatgaggct
gatgaaatgttgaataaaggtttcaaagaacagatctatgatgtgtacaggtacttgccc
ccggccactcaggtggtgctcatcagtgccacgctgccccatgagatcctggagatgacc
aacaagttcatgaccgatcctatccgcattttggtgaaacgtgatgaactgactctagaa
ggcatcaagcagttttttgtggctgtggagagagaagagtggaagttcgacacgctgtgt
gacctctatgatacgctgaccatcactcaggctgttatcttctgtaacaccaagaggaag
gttgactggctgacggagaagatgagggaagccaacttcactgtgtcatccatgcacggg
gacatgccccagaaggagcgcgagtccatcatgaaggagttccggtcgggtgccagccga
gtgctcatttctacagacgtctgggcccgggggctggacgtgccccaggtgtccctcatc
attaattacgacctgcccaacaacagagagctgtacatacatagaattgggcgatcaggt
cgatatggccgaaagggcgtggccattaattttgtgaagaatgatgatatccgaatcctc
agagacattgagcagtactactccactcagattgacgagatgcccatgaacgttgctgat
ctgatttga

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