KEGG   Physeter macrocephalus (sperm whale): 102979577
Entry
102979577         CDS       T06011                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102979577 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102979577 (WDR82)
   03036 Chromosome and associated proteins [BR:pcad03036]
    102979577 (WDR82)
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102979577 (WDR82)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     102979577 (WDR82)
    COMPASS/SET1 complex (yeast)
     102979577 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 VPS8_N MinC_C
Other DBs
NCBI-GeneID: 102979577
NCBI-ProteinID: XP_023979715
Ensembl: ENSPCTG00005006550
UniProt: A0A2Y9STB1
LinkDB
Position
18:41182313..41200482
AA seq 313 aa
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAVKRVVMHTFGGYASSKT
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tcggacaagattaactgcttcgacttcagccccaacggcgagaccgtcatctcgagcagc
gacgacgactccatcgtgctctatgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaaatatggcgtggacctcatcagatacactcatgcagcaaacacagtcgtttac
agctctaacaaaatagacgatactatccgttacctgtccttgcatgacaacaaatacatc
agatactttcctggacataacaaaagggtggtggccttgtccatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcggctctgggatctccggtctcctaac
tgccagggtcttatgcatttacagggcaagccagtttgttcttttgatccagaaggatta
atttttgctgcaggtgtcaattctgaaatggtcaaactttatgatcttcgctcttttgat
aaggggccatttgcgacatttaagatgcagtatgatcggacttgtgagtggacaggactt
aagttcagcaatgatggcaaactcatcctcatctccaccaatggcagcttcatccgtctg
atcgatgcagtcaagcgagtggtgatgcatacgtttgggggttatgccagcagcaaaacc
gtcacactggaggcctcgtttactccagactcgcagtttattatgattggttcagaggat
ggcaagatccatgtctggaatggagagagtggtataaaagtagctgtgttggatggcaaa
cacacaggccccattacctgtttgcagttcaaccccaagttcatgacctttgccagtgct
tgttccaacatggccttctggttgcccaccattgatgactga

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