Physeter macrocephalus (sperm whale): 102979577
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Entry
102979577 CDS
T06011
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102979577 (WDR82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102979577 (WDR82)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102979577 (WDR82)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102979577 (WDR82)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
102979577 (WDR82)
COMPASS/SET1 complex (yeast)
102979577 (WDR82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
NBCH_WD40
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
VPS8_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
102979577
NCBI-ProteinID:
XP_023979715
Ensembl:
ENSPCTG00005006550
UniProt:
A0A2Y9STB1
LinkDB
All DBs
Position
18:41182313..41200482
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AA seq
313 aa
AA seq
DB search
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAVKRVVMHTFGGYASSKT
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tcggacaagattaactgcttcgacttcagccccaacggcgagaccgtcatctcgagcagc
gacgacgactccatcgtgctctatgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaaatatggcgtggacctcatcagatacactcatgcagcaaacacagtcgtttac
agctctaacaaaatagacgatactatccgttacctgtccttgcatgacaacaaatacatc
agatactttcctggacataacaaaagggtggtggccttgtccatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcggctctgggatctccggtctcctaac
tgccagggtcttatgcatttacagggcaagccagtttgttcttttgatccagaaggatta
atttttgctgcaggtgtcaattctgaaatggtcaaactttatgatcttcgctcttttgat
aaggggccatttgcgacatttaagatgcagtatgatcggacttgtgagtggacaggactt
aagttcagcaatgatggcaaactcatcctcatctccaccaatggcagcttcatccgtctg
atcgatgcagtcaagcgagtggtgatgcatacgtttgggggttatgccagcagcaaaacc
gtcacactggaggcctcgtttactccagactcgcagtttattatgattggttcagaggat
ggcaagatccatgtctggaatggagagagtggtataaaagtagctgtgttggatggcaaa
cacacaggccccattacctgtttgcagttcaaccccaagttcatgacctttgccagtgct
tgttccaacatggccttctggttgcccaccattgatgactga
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