Physeter catodon (sperm whale): 102979602
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Entry
102979602 CDS
T06011
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X3
KO
K09173
regulatory factor X 1/2/3
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102979602 (RFX1)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Other basic domains
RF-X
102979602 (RFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
102979602
NCBI-ProteinID:
XP_023990123
Ensembl:
ENSPCTG00005014609
UniProt:
A0A2Y9TIG7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MATQAYVTELQAAPQPSQPPQAPPQAQPQPPPPPPSAAPQPPQPPAATATPQPQYVTELQ
SPQPQAQPPGGQKQYVTELPATPTPSQPAGTPAPSPASQQYIVVTVSEGAMRASETVSEA
SPGSTAGQTGVPTQVVQQVQGTQQRLLVQTSVQSKPGHVSPLQLTNIPVPQQALPTQRLV
VQSTVPGGKSGQVSLTVHGTQQVHSPPERSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQ
SVPVTQERSVVQATPQVPKAGPVQQLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVE
GSDASYTASAIRSSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMY
VSGSQVVASSTSSGSGASNSSSGGSGGGGGGGGGGGSGSSSGSGAGTYVIQGGYMLGSAS
QSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIR
SVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQK
MEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLPDFSELDLQGKVLPEGIGPGDI
KAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKA
SLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHA
MVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFAN
VQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKA
AKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAV
MGEFANLATTLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPEALEPPAKLSR
TDARGLFVQALPSS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcatacgttactgagctacaggcagccccgcaaccatcccagccgcca
caggcccctccacaggcccagccccagccaccgccaccaccaccctcagcagcaccccag
cccccccagccccccgccgccaccgccaccccccagccccagtatgtcaccgagctgcag
agtccgcagcctcaggcacagccaccgggcggccagaagcagtacgtgacagagctcccg
gccacccccacgccctcgcagccagccggcacacccgccccatccccggcgtcccagcag
tacatcgtggtcaccgtctccgaaggtgccatgcgggccagcgagactgtgtcagaggcc
agcccgggatccacggccggccagaccggagtccccactcaggtggtgcagcaggtgcag
ggcacccagcagcggctgctggtccagacgagtgtgcagtccaagccaggccacgtgtca
cccctccagctcaccaacatcccggtgccccagcaggctctccccacacagcgtctggtg
gtgcagagcacagtcccgggcggcaagagcggccaggtctccctgacggtgcatggcacg
cagcaggtgcactcacctcctgagcggtcgccagtgcaggccaatagctcctccagcaag
acggctggggcccccacgggcacggtgcctcagcagctgcaagtccacggcgtccagcag
agtgtccccgtcacccaagagaggtctgtggtccaggccactccacaagtgcccaaagct
ggccccgtgcagcagctcacagtgcaagggctccagccggtccacgtggctcaagaggtg
cagcagctccagcaggtgccagtcccacatgtgtactccagccaagtgcagtatgtggag
ggcagtgatgccagctacacggccagcgccatccgctccagcacctacccctaccccgag
acgccactgtacacgcagacggcaggcaccagctactatgaggccgcgggcacggctgcc
caggtcagcacacctgccacctcccaggcggtggccagcagtggctctgtgcccatgtac
gtgtccggcagccaggtcgtcgccagctccaccagcagtgggagtggggccagcaacagc
agcagcggcggcagtggcggcgggggaggcggtggcggtggcggtggcagtggcagcagc
agtggcagcggagcaggcacctacgtgatccaaggcggctacatgctgggcagtgccagc
cagtcctactcccacaccacccgtgcctcaccagccactgtgcagtggctcctggacaac
tatgagacagccgagggcgtgagcctgcctcggagcaccctctactgccactacctgctg
cactgccaggagcagaagctggagcccgtcaatgccgcctccttcggcaagctcatccgc
tctgtcttcatgggcctgcgcacccggcgtctcggcaccaggggcaactccaagtaccac
tactatggcctgcgcatcaaggccagctcacccctgctgcggctgatggaggaccagcag
cacatggccatgcggggccaacccttctcgcaaaaacagaggctcaaacccatccagaag
atggagggcatgaccaacggtgtggccgtggggccacagcaggccactgggctgtcggac
atcagcgcccaggtccagcagtaccagcagtttctggatgcctcgaggagcctccctgac
ttctcagagctcgacctccagggcaaagtgctgcctgaaggcatcgggcctggggacatc
aaggccttccaggtcctgtaccgggaacactgtgaggccatcgtcgatgtcatggtgaac
ctgcagttcaccctggtggagacgctgtggaaaaccttctggaggtacaacctgagccag
cccagcgaggcaccgccgctggctgtgcatgatgaggccgagaagcggctgcccaaggcc
agcctggtgctcctctccaagttcgagcccgtgctccagtggaccaagcactgtgacaat
gtgctgtaccagggcctggtggagatcctcatccccgatgtgctgcggcccatccccagt
gccttgacccaagcgatccggaactttgccaagagcctggagagctggctcacccacgcc
atggtgaacatacccgaggagatgctgcgggtgaaggtggcagcggccggcgccttcgcg
cagaccctgcggcgctacacgtcgctcaaccacctggcgcaggcggcgcgcgctgtgctg
cagaacacggcgcagatcaaccagatgctgagcgatctcaaccgcgtggacttcgccaac
gtgcaggagcaggcctcgtgggtatgccgctgcgaggaccgcgtggtgcagcggctggag
caggacttcaaagtgactctgcagcagcagaactcactggagcagtgggcggcctggctg
gacggcgtcgtgagccaagtgcttaagccctaccagggcagcgccggctttcccaaggct
gctaagctcttcctcctcaagtggtccttctacagctccatggtgatccgggacctgact
ctgcgcagcgccgccagcttcggctccttccatctcatacggctgctctacgatgagtac
atgtactacctgatcgagcatcgcgtggcccaggccaagggcgagacccccattgccgtc
atgggcgagttcgccaacctggccaccacgctgaaccccctggacccggacaaagacgag
gaggaggaagaggaggaggaaagcgaggacgagctgccgcaggacatctcgctcgcggcc
ggtggcgagtcgcccgcgctgggccctgaggctctggagccaccggccaagctgtcgcgg
acagacgcacgcggcctcttcgtgcaggcgctgccctccagctaa
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