KEGG   Physeter macrocephalus (sperm whale): 102979689
Entry
102979689         CDS       T06011                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102979689 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcad03041]
    102979689 (SF3A1)
Spliceosome [BR:pcad03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102979689 (SF3A1)
 Complex B
    102979689 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    102979689 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 102979689
NCBI-ProteinID: XP_023976790
Ensembl: ENSPCTG00005005169
UniProt: A0A2Y9SKD1
LinkDB
Position
19:4363147..4383904
AA seq 793 aa
MPAGPVQAVPPPPPAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgcggccaccgagcccaaa
cagcccacagaagaggaagcatcttcaaaggaggattctaccccttccaagccagtggtg
ggtattatttaccctcctccagaggtcaggaatatcgttgacaagactgccagcttcgtg
gccagaaatggacctgaatttgaagctaggatacgacagaacgagatcaacaaccccaag
ttcaacttcctgaaccccaacgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaagcccaggagccctcggctgccatccccaaggtcatgcagcagcag
cagcaagccacccagcagcagctgccccagaaggttcaagcccaagtgatccaagagacc
atcgtgcccaaagagccccctcccgagttcgagttcattgcagaccccccctctatctca
gccttcgacctggacgtggtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctaacccagctgatgcagaaggagcagcgcaactaccagtttgacttccttcgcccg
caacacagccttttcaactacttcacgaagctggtggaacagtataccaagatcttgatt
ccacccaaaggcttatttaccaagctcaagaaagaggcagagaacccccgggaagttttg
gaccaggtatgttaccgagtggagtgggccaagtttcaggagcgtgagaggaagaaggaa
gaggaggagaaggaaaaggaacgggtggcctatgctcagattgactggcatgattttgtg
gttgtggaaactgtggacttccaacccaatgagcaagggaactttcctccccccaccacc
ccagaggagctgggggcccgaatcctcattcaggagcgctacgagaagtttggggagagt
gaggaggtcgagatggaggtcgagtctgatgaggaggacgagaaacaggagaaggcggag
gagcctccgtcccagctggaccaggacacccaagtgcaagacatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacctccagagacacccatgccaccacctctg
cccccaactccagaccaggtcattgtccggaaggactatgacccaaaagcttccaagccc
ctgcctccagcccctgctccagatgaatatctcgtgtcccccatcactggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattgggcttcttgacccccgttggttggag
cagcgagatcgctccattcgtgagaagcagagtgatgatgaggtgtacgcaccaggtctg
gatattgagagcagcttgaaacagctggctgagcggcgtactgacatctttggtgtagag
gaaacggccattggtaagaagattggcgaggaggagatccagaaaccagaggaaaaggtg
acctgggatggccattccggcagcatggcccggacccagcaggctgcccaggccaatatc
accctccaggagcagatcgaggccattcacaaggctaagggcttggtgccagaagatgat
accaaagagaagattggccccagcaagcccaatgaaatcccccagcagccaccacctccg
tcttcagccaccaacatccccagctcagccccacccattacctcggtgccccggccaccc
gcgatgccacctcccgtccgtaccacagttgtgtctgcagtacctgtcatgccccggccc
ccgatggcatcagtggtccgactgccccccggctcggtgatcgcccccatgccaccgatc
atccacgcgcccagaatcaacgtggtgcccatgcctccctcggcccctcctatcatggca
ccccgcccaccacccatgattgtgccgacagcttttgtgcctgcaccacctgtggcaccc
gtcccagctccagcccctatgccgcctgtccaccccccacctcccatggaagatgagcct
gcctccaagaaactgaagaccgaggacagcctcatgccagaggaagaatttctacgcaga
aataagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aagctgaatggacaggtgctggtcttcaccctcccactcacagaccaggtctctgtcatc
aaggtgaagattcacgaagccacgggcatgccagcagggaaacagaagctgcagtatgag
ggcattttcatcaaggattccaactcgctggcttactacaacatggctaatggtgccatc
atccacctggcgctcaaggagagaggcgggaggaagaagtag

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