Physeter macrocephalus (sperm whale): 102979888
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Entry
102979888 CDS
T06011
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102979888 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcad01007
]
102979888 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102979888 (GARS1)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102979888 (GARS1)
Enzymes [BR:
pcad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
102979888 (GARS1)
Amino acid related enzymes [BR:
pcad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
102979888 (GARS1)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102979888 (GARS1)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102979888 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
Motif
Other DBs
NCBI-GeneID:
102979888
NCBI-ProteinID:
XP_054940909
Ensembl:
ENSPCTG00005004897
UniProt:
A0A9W2WNX5
LinkDB
All DBs
Position
5:complement(47095421..47139290)
Genome browser
AA seq
739 aa
AA seq
DB search
MPSLRPALLRAARAALLLSPPPRLPSRPPLLPCRPISKPARAPTSFPAATSRSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDVVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLVKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPKTVSVVQFEPNKGAIGKAYKKDAKLVMEYLAICDECYITEMEKLLNEKGEF
TIETEGKTFQLTKDMVNVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTVFEHTFQIREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGISHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMQQIRAEVSELPSVVRDLANGSITWADVE
ARYPLFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgcgcccggcgctgcttagagccgcccgcgccgctctgctgctgtcgccg
ccgccccggctcccgtcccggcctcctcttctgccctgccggcccatcagcaagccagcc
cgcgccccgacctctttccccgctgccacctcccggagcagcatggatggcgcgggggct
gaggaggtgctggcacctctcaggctagcggtgcgccagcagggagatcttgtgcgaaaa
ctgaaagaagataaagcaccccaggttgatgtagacaaagcagtagctgagctcaaagcc
cggaagagggttctggaagcaaaggagctagcgttacagcccaaagatgatgttgtagac
agagcaaaaatggaagataccctgaagaggaggtttttctacgatcaggcttttgctatt
tatggaggtgttagtggtctctatgattttgggccagttggatgtgctttgaaaaacaat
attattcagacctggaggcagcactttatccaagaggaacagattctggagattgattgc
accatgctcacccctgagccagttttgaagacttctggccatgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagagtgttttcgtgctgaccatctattgaaagct
catttacagaaattgatgtctgataagaagtgttctgccgagaagaaatcagagatggaa
agtgtcttggcccagcttgataactatggacagcaagaactgggggatctttttgtgaac
tataatgtaaaatcccccactactggaaatgatctttcccctccagtgccttttaactta
atgttcaagaccttcattgggcctggaggaaacatgcctggatacttgagaccagaaact
gcacaggggattttcctgaatttcaaacgacttttggaattcaaccaaggaaagttgcct
tttgctgctgcccagattggaaattctttcagaaatgagatctcccctcgatctggactg
atccgagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaaa
gaccatcccaagtttcagaatgtggcagacctccacctgtatttgtattcagcgaaagcc
caggtcagtggacagtctgctcggaaaatgcgcctaggagatgctgttgaacagggcgtg
attaacaactcagtattaggctatttcattggccgcatctacctctacctcgtgaaggtt
ggtgtatctccagataagctccgcttccgacagcacatggagaatgagatggcccattat
gcctgtgactgttgggatgctgaatccaaaacatcctatggctggattgagattgttgga
tgtgctgaccgttcctgttatgacctttcttgtcatgcgagagccactaaagtcccactc
gtagctgagaagcctctgaaagagcccaaaacagtcagtgttgttcagtttgaacctaat
aagggagcaattggcaaggcgtataagaaggatgcaaagctggtgatggagtaccttgcc
atttgtgatgagtgttacattacagaaatggagaaactactgaatgaaaaaggggaattt
actattgaaactgaagggaaaacatttcagttgacaaaagacatggtcaatgtgaagagg
ttccagaaaacactacatgtggaagaagttgttccgagtgtaattgaaccctcatttggc
ctgggtaggatcatgtatacagtatttgaacatacattccaaatacgcgagggagatgaa
cagagaacgttcttcagtttccctgctgtagtagctccattcaaatgttccgtccttcca
ctgagccaaaaccaggagttcatgccgtttgtcaaggaattatcggaagccttgaccagg
cacggcatctctcacaaagtagacgattcctcggggtccatcggaagacgctacgccagg
actgatgagatcggcgtggctttcggcatcaccattgactttgatacagtgaacaagacc
cctcacacggcaaccctgcgggaccgagactccatgcagcagataagagcagaggtctct
gagctgcccagtgtagttcgcgatctggccaatggcagcatcacgtgggctgacgtggag
gccagatatcctctctttgaaggtcaagagactgggaaaaaagagacaatcgaagaatga
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