Physeter catodon (sperm whale): 102980072
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Entry
102980072 CDS
T06011
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102980072 (TARBP1)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980072 (TARBP1)
Enzymes [BR:
pcad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
102980072 (TARBP1)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102980072 (TARBP1)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102980072 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
102980072
NCBI-ProteinID:
XP_023971404
Ensembl:
ENSPCTG00005012747
UniProt:
A0A2Y9S674
LinkDB
All DBs
Position
20:complement(5140790..5214274)
Genome browser
AA seq
1644 aa
AA seq
DB search
MGARGRRRAGQMECVLAEALLSQSRDPRVLLGALCCEEASAERVETLRFLLQRLEDEEAR
GGGAGALPEAAREVAAGYLVPLLRGLRGRPAGGADTGPAAPQRRRVLRAAGAALRSCARL
AGGPQLAAALAEEALRDLLAAGPAPGLDGAEEARRDLRAAGPAPGLDGAAEAAVEVLAAV
GPCLRPREDAPLLERVARAALALALGGDEAGPAEGAAALVAGRLLPALGRCGGAALRAVW
GGLVAPGAPEGPGRVGPKLLVLSALAEKLLPDPGAERAAAAREAGPDARRCWSFWRTVQA
GLTRAEDALTRKRARYLLQRAVEVSAELGADCACTPQEGTGPSLFWWSEKKKDELLKFWE
NYILIMETLEGNQIHVIKPVLPKLNNLFEYAVSEENGCWLFHPSWHLCIYKRMFESENKI
LTKEGVTHFLELYETRVLPFSAEFSEFIIGPLMDALSESSLYSRSPGQLIGSGSPLGLKL
QKFLVTYISLLPEEIKSSFLLKFIQKMTSRHWCAIPILFLSKALANIPRCKALGVEGLLA
LRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEKVSLSDVSSLVMSVRQEESFGRGTS
LWTELCDWLRVNESCFRRPSTCSSIGLHETSSLNAYVKNLVQEYIKSPAWEGGENCCMPD
WLEAKLVAMMVLLAIDVEGMKSQYSEKRRTQNVLRIFLDPLLDALVKFGTNAYMPLLKTD
RCLQLLLKLLHTCLLKGSGTQDVAHTDEVLTLLQNFVMSTTESISEFILRRLTMKELSSV
SDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVIFPLKNASIRHLQEMDRGQEPTLGRQ
IQRVVSMAALAMVCEAIDQKPELQLDSRDAGATERFLSSLQLNQTLQKPHTQEDSSFFEE
SSSSQGWGKIVAQYIHDQWVCLSFLLKKYHTLIPASEDEILEPILPAVQMPIRTLQSALE
ALTILPSDQVLPVFHCMKILVPKLLTSSESLCIVSFDMAWKIIASLSNTQLIFWSNLKAF
VQFVFDPKVLTIAAKIKGQAYFKIKEIMYRIIEMSAIKTGVFNILISYCCKSWIVSASNV
SLSTAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGHECAANTVIENTKREDHYVR
ICAVKFLCLLDGSNMSHKLFMEDLAFKLLEKDELVSKSRTRYYVNSQQHRVKNRIWQTLL
VLFPRFDQNFLNRIIDKIFQAGFISNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYAE
ENLKTSICTFLSVLSHLDILTENIPEKKLILKQALIIVLHWCFNHNFSIRLYALVALKKI
WSMCKTLHIEELDALTSIIESSLNQVENMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLE
TIFYILPRLSGLVEDEWIAIGKFTRFTDIPLDAGFQWYLSPTQLCELKPGDWSQQDIGSN
SGEADNESEWSDVQKKIIPWRNNVPDSDLELVFQDRAAKLGKSLSRLIVVASLIDKPTNL
GGLCRTCEVFGASALVVGNLQCIRDKQFQHLSVSAEQWLPLVEVKAPQLIDYLQQKKAEG
YTIVGVEQTVKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGVIRSLNV
HVSGALLIWEYTRQQLLKQGDPGS
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctcggggtcggcggcgcgcggggcaaatggagtgcgtgctagcggaagcgctg
ctctcgcagagccgggacccccgggtcctgcttggggcgctgtgctgcgaggaggcgtcc
gcggagcgcgtggagacgctgcgctttcttctgcagagactggaggacgaggaggcgcgc
ggcggcggcgcgggcgcgctcccggaggcggcgcgcgaggttgccgccgggtacctggtg
ccgctgctgcggggcctgcgcgggcgccccgcgggcggcgcggacaccggcccagcggcc
ccccagcgccggcgcgtgctgagagcggcgggcgcggccctgcgctcgtgcgcccgcctc
gccgggggcccgcagctggcggccgcgctggccgaggaggcgctgcgcgacctgctcgcc
gcgggccccgcacccggcctcgacggggccgaggaggcgcggcgcgacctgcgcgccgcg
ggccccgcacccggcctcgacggggccgccgaggcggccgtggaggtgctggcggccgtg
gggccttgcctgcggccccgcgaggacgcgccgctgctggagcgggtggcgcgggccgcc
ctcgccctggcgctaggcggggacgaggcggggcccgccgagggcgcggcggcgctggtg
gccgggcggctgctgccggcgctgggccggtgcggcggggcggcgctgcgggccgtgtgg
ggcgggctggtcgcccccggggcgcccgaggggccgggccgtgtcgggccgaagctgctg
gtgcttagcgccctggcggagaagctgctgcccgaccccggcgcggaacgcgcagccgcg
gcgcgcgaggcgggcccggacgcccggcgctgctggagcttctggaggacggtgcaggcg
gggctgacccgggccgaggacgccctgacgcgcaagcgggcgcgctacctgctgcagcgg
gctgtggaggtgtcggcggagctgggggccgactgcgcgtgcacaccccaggaaggaacc
ggcccaagtctgttttggtggtctgagaagaaaaaagatgagcttctaaagttttgggaa
aactatattttaattatggaaactcttgaaggaaatcagatacatgttataaagccagtt
ttaccaaagctaaacaatctgtttgaatatgcagtgtcagaggaaaatggatgttggctc
tttcacccatcctggcatctgtgtatttataaaagaatgtttgaaagtgaaaataaaatc
ctgaccaaagaaggcgttacccattttttggagctctatgaaacaagggttcttccattt
tcagcagaattttctgagtttattattgggccattaatggatgcactttcagagagctct
ctgtacagcaggtccccaggccagctgataggaagtggttctccattgggattgaaatta
cagaagttcttagtcacttacatttctcttcttccagaagaaataaagagtagtttcctg
ttaaagtttattcagaagatgacaagccgacattggtgtgctattcccattttgtttcta
tctaaggctttggcaaatatcccaagatgtaaagccctgggtgtagaagggcttcttgcc
ctgagggacgttcttcagtgcaccatgatcacacatcagatcctgctgcgaggggcagcg
cagtgctatctccttcagacggccatgaatctggtagacgtggagaaagtgtccctctct
gatgtctcatctctcgtcatgtcagtgagacaagaggagtccttcggacgaggaacttca
ttgtggacagagctctgtgattggttgcgtgttaatgaaagctgttttaggcgaccctca
acttgtagctccattggacttcacgagacatcctctttaaatgcttatgtaaagaaccta
gtccaagagtatattaagtcacctgcctgggaaggaggagaaaactgctgtatgcctgat
tggcttgaagccaagcttgttgctatgatggtcttgctggccatagatgtggaaggaatg
aagagtcaatatagtgaaaagcggaggacacagaatgtattaaggatattcttagatcct
ctcctggatgcccttgtgaagtttggtacaaatgcctacatgcccttgctgaaaactgac
agatgcctgcagttgctgttgaagttactgcacacttgcttgttgaaaggttccggtacc
caagatgttgcacatacagatgaggtgttgactcttcttcagaactttgtcatgtctacc
acagagagcatttcggaatttattctcagaagacttactatgaaggaactaagtagtgtt
tcagatctggatcgttgccatttgtacctgatggtattaactgaacttataaatctccac
ttgaaggttggatggaaaagaggcaaccctatttggagagttatttttcctttgaaaaac
gcatccattcggcatcttcaagagatggaccgtggacaggaaccgacactgggtagacag
attcagagagttgttagtatggctgccttggccatggtgtgtgaggccattgaccagaag
ccagagctacagctggactctcgggatgcgggagccacggaaaggttcctctcctctctc
cagctcaatcagacgctgcagaagccccacacacaggaggacagcagtttttttgaagag
tcatcatcttcccaaggatgggggaaaatagttgcacaatatattcatgatcagtgggtc
tgcctctctttcttgttgaaaaaatatcacacccttataccagcctcagaggatgaaatt
ctggagcccattctacctgctgttcaaatgccaataaggactttgcagtccgcactagaa
gccctcacaattcttccttctgatcaagttttacctgtgttccattgcatgaaaattttg
gttcccaagcttctgacctcctctgaatctctctgcatagtgtcttttgacatggcttgg
aaaatcatagcttctttaagcaacactcagctgatattctggtctaatttaaaagctttt
gttcagtttgtttttgatcccaaagttcttaccattgctgcaaaaatcaagggccaggca
tatttcaaaatcaaagagattatgtacaggataattgaaatgtctgctataaaaactgga
gtcttcaatatattgataagttattgctgcaaatcttggatagtttctgcttcaaatgtg
tctttatctactgctaaaaattacagcgaacttgtccttgaggcgtgtatatttggaaca
gtgtttcggcgtgatcaaagacttattcaggatgtacagaccttcatagaaaaccttggg
catgagtgtgcagcgaacacggttattgaaaatactaaaagagaggaccattatgtgaga
atttgtgctgtcaaattcctgtgtttattagatggctcaaatatgtctcataagttgttt
atggaagatcttgcattcaagctattagaaaaagatgaattggtgtccaagtcaagaact
cgatactatgtgaattctcaacagcatagagtgaaaaaccgaatatggcagactctgctt
gtactttttcccagattcgatcagaatttcttgaatagaattattgacaagattttccag
gctggtttcatcagtaatcaagcatccataaaatattttatagaatggattattatattg
attcttcataaatttcctcaatttcttccgaagttctgggactgtttttcttacgctgaa
gaaaaccttaaaacaagcatttgtacatttttatcagttttgtcacatttggacatcctt
actgaaaatattccagagaagaaactaattctgaagcaagcccttattatcgtactgcac
tggtgttttaatcacaattttagcattcgactgtatgccttagttgctcttaagaaaatc
tggagcatgtgtaagacattgcacattgaagaacttgatgctttgacttccattattgaa
tccagtctgaatcaagtggaaaacatgcatggagcagggaacgcgaagaagaactggcaa
cggatccaggagcatttcttctttgcaacgttccacccacttaaggattactgtctggag
accatattttacatccttccacgcctttccggccttgttgaggacgaatggattgccatt
ggtaaatttaccaggttcactgacattcctttagatgcaggatttcagtggtacctttct
ccaactcagctctgtgaactaaaaccaggtgactggtcccagcaggacataggctctaac
tcaggcgaagcagataacgagtcagagtggagtgatgttcagaagaagattatcccgtgg
agaaacaatgttcccgactcagacctggagctggtgtttcaggatcgtgcggccaaactt
ggaaagtcactcagcagactgattgtagtggcctcactcattgacaaaccaaccaactta
ggagggctgtgccggacctgtgaggtgttcggggcctcggcgctcgtggttggcaacctt
cagtgcatcagagacaaacagtttcagcacctcagcgtttcagcagaacagtggcttcct
ttagtggaggtaaaagcacctcagctgatcgattatctgcaacagaaaaaagcagaaggt
tacaccatcgtgggtgtggaacagactgtgaaaagtttagacctaacccagtactgcttc
cctgagaagtctctactcttgttgggaaatgaacgggaaggaattccagcaaatctgatc
cagcagttggacgtgtgcgtggaaattcctcaacagggcgtcatccgctccctcaacgtc
cacgtgagtggagctctgctcatctgggaatacaccaggcagcagctgctgaagcagggg
gaccccgggtcctga
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integrated database retrieval system
