Physeter macrocephalus (sperm whale): 102980291
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Entry
102980291 CDS
T06011
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102980291 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102980291 (RAD54B)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102980291 (RAD54B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
102980291
NCBI-ProteinID:
XP_007117690
Ensembl:
ENSPCTG00005007630
UniProt:
A0A2Y9F9M6
LinkDB
All DBs
Position
15:41748501..41868078
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AA seq
910 aa
AA seq
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MRRSAAPSQLQGNPFKKPKFIPPARSNASPNEEVTKLNSDIKLFKVAANKNTFLQSQNDP
RICSFNLPTEESSRGINHEDNNREKYCLEASAKTTTSDPHHTVHLAPKEITVSKGQEEEP
DSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFTLKDLEGKDIGRGIGYKFKELEKIE
EGQTMMIGGKEIEVMGIISPDDFNSGRCFQLGGGSSSALPSSQAVKKCFSNPFKSVCKLS
SKENRQNSFQNCKPRHDPYAPNSLTMLRPDNNHQWMFNKNCFPVVDVVIDPHLVFHLRPH
QKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTL
VVSPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFTKSSFYSVLIISYEMLLRSLDQ
IKSIKFDLLICDEGHRLKNRTIKTATALINLSCEKRIILTGTPVQNDLQEFFALIDFVNP
GILGSLPSYRKIYEEPIIKSRQPSASEEEKELGERRAAELTCLTGLFVLRRTQEVINKYL
PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLENSSHLICIGALKKLCNHPCLLF
SSVKEKECSSTWDENEERNLYEGLINVFPADYNPLMFTEEESGKLQVLSKLLAVIHELCP
DEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTQISQRQQIVDGFNSKYSSDFIFLLS
SKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIY
QRQISKQGLSGAVVDLTKTCDHIQFSVEELKNLFTLHESSHCVTHDLLDCECTGENHTGD
SLEKFPVFRNCQLGTHQQKSDSLKPVSMSQLKQWKHFSGDHLNLTDPFLERIRENVSFFF
QNITNQTTAI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatcggcagcaccaagtcagttgcaagggaatcccttcaaaaagccaaaattt
ataccgccagcaagaagtaatgcaagtcctaatgaagaggttacaaagctgaattcagat
ataaaattatttaaggttgctgcaaataagaatacttttctgcagtcacaaaatgatccc
agaatatgcagttttaatctgcctactgaagaaagttctagaggaattaatcatgaggat
aataacagggaaaaatattgtttggaagcatctgcaaagacaacaacatcagacccacat
catacagttcatttagcccctaaagaaataacagtgtctaagggacaagaagaggaacct
gatagcctggttaaatatttcagtgttgtttggtgtaagccttcaaagaaaaaacacaaa
aagtgggaaggtgatgctgttcttattgtaaaaggaaagtcatttacattaaaggatttg
gaaggcaaagacattggaagaggcattggatataaattcaaagagcttgaaaagattgaa
gagggccaaacaatgatgattggtggaaaagaaatagaagtcatgggtataatctctcca
gatgatttcaacagtggcagatgttttcagcttggaggaggaagttcttctgccttacct
tcttctcaagctgtcaagaagtgtttctctaacccgttcaaaagtgtctgtaaactaagt
tcaaaggaaaatagacagaacagtttccaaaattgcaaaccacgccatgacccatatgca
ccaaattcccttactatgctccggccagataataatcaccagtggatgttcaataagaac
tgttttcctgttgtggatgtagtgatagatcctcaccttgtatttcaccttcgaccacat
cagaaagaagggatcatattcctttatgaatgtgtgatgggaatgagggtgaatggcaga
tgtggagctattcttgctgatgaaatgggtttagggaaaacattgcaatgtatttcgctc
atctggactctacagtgtcagggaccctatggtggcaagccagtaataaagaagacactt
gttgtctcacctggaagcttggtgaataattggaggaaagaatttcaaaaatggctagga
agtgaaaggatcaagatatttactgttgatcaggaccacaaagtagaagaattcaccaaa
tcttcattttattctgttcttatcatcagttatgaaatgttacttcgttccctggatcaa
attaagagtataaaatttgatcttctaatttgtgatgaagggcatcgtttgaagaacaga
accattaagacagctacagccctcattaacctctcctgtgagaaaaggataattctgact
ggtactccagttcagaatgatctccaagaattttttgcattaattgattttgtaaatcca
ggaatattaggctctttgccatcttatagaaaaatatatgaagaacccatcattaaatcg
agacaaccttctgcttcggaggaagaaaaggagttaggagagagaagagcagctgaactt
acttgcctcactgggctctttgtccttagaagaacccaagaagtcataaataaatatctc
ccacctaagatagagaatgtagtcttttgccgaccaggagccctacagattgaactttat
cgaaaactgttgaattctcaggctgtcagattctgtcttcaaggattgttggaaaatagt
tctcatctaatatgtatcggagctcttaaaaaactgtgcaatcacccctgccttttgttc
agctcagtaaaggaaaaagaatgcagctcaacttgggatgagaatgaagaaaggaatcta
tatgaaggcttgataaatgtgtttcctgctgattacaacccgctcatgtttactgaggaa
gagtcaggaaaactacaggtgctgtcaaagctcttagctgttatccacgaactttgtcct
gatgaaaaggtggtgttggtatccaactatacacaaaccttgaatattttacaagaagta
tgcaagcgtcatggatatgcttatacaagacttgatggacagacacagatctctcaaagg
caacaaattgttgatggctttaatagtaaatactcttctgattttatttttctgttaagt
tcaaaagctggtggtgtgggacttaaccttattggaggatctcacttaattctctatgac
attgattggaatccagccactgatatccaggcaatgtctagagtgtggagagatggtcag
aaacatcctgtacatatttacagactcttaaccacaggtacaatagaagaaaagatctat
caaaggcaaatcagtaagcaaggtctctctggggcagttgtagacctaaccaagacatgt
gatcacattcagttttcagtagaagaacttaaaaatttgttcacattacatgaaagttca
cattgtgttactcatgacctgcttgactgtgaatgtacaggagaaaatcatacaggtgat
tcattggaaaaattccctgtctttagaaattgtcagcttggtacacatcaacagaagtct
gactccctgaaacctgtctccatgtcacagctgaagcaatggaaacatttttctggagat
catttaaatcttacagatccttttcttgaaagaataagagaaaatgtgtcattctttttt
cagaatataaccaatcaaactactgctatataa
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