Physeter macrocephalus (sperm whale): 102980315
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Entry
102980315 CDS
T06011
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X7
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102980315 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980315 (JMJD1C)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102980315 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
102980315
NCBI-ProteinID:
XP_007121578
Ensembl:
ENSPCTG00005021543
UniProt:
A0A2Y9FFA0
LinkDB
All DBs
Position
20:complement(15953930..16270499)
Genome browser
AA seq
2436 aa
AA seq
DB search
MTTLQTFKPLVEKSIPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQ
EEVKVWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQ
VLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPR
PAMNSQAAVPKQNSHQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQV
MNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSK
INGEDGKSQNNEKAGEETLIDSQPPWDQIQEDKKHEETEKQKSVDSQIQEKMIIRSSEQA
TLSDRNSNDLLLQERNMEKTHTVELLPKEKFVSRPPTPKCVIDITNDINAEKVAQENSSI
FGLQTLQKMDPNVSDSKHSVTNTKYLETANQDSDQSWVSDVVKVDLTQSNVRNASSGNEN
LNMEKEKNQYVSYISSLSAVSVTEDKLHKRSPPPETIKFKLNTSVDAHKTKSNPSPEVVK
PKINHSPDSVKSKSTFANSQTAGERRLANKIEHELSRCSFHPVPSRGSTLETTKSPLIID
KNEHFTVYRDPALVGSDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALSPAPHLLA
GSSSQTPLPAISAHPLTGAPHHSVHPPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHL
ALAHQQQQQLLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHP
ENAVNAESSLRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPL
TKCLVDHHKEELERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQR
PPQETGERLNKYKEEHRRILQESIDVAPFTTKIKGLEGERENYSRVASSSSSPKSHVIKQ
DKDVECSVSDLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTL
GAAAANPQTLTSFISSLSKPPPLIKHQPESEVNLVGKIPEHLPHQIAAHSVTTFRNDCRS
PTHLTVSSTNTLRSMPALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVLPVNAGGKVQ
ESQKPPTLIPEPKDTQANFKSSSEQSLTEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASV
IVRPPSSTKLDSMPAMQLASKDRVSERSSIGANQTDCLKSAEAGESGRIILPSVNSDSAH
IKSEKNFQAVSQGSVPSSVMSAVNTMCNTKTDIFTSAATTTSVSSWGGSEIIYSLSNTIL
ASKSLECTSSKSVSHSVAQTLECRVSTTAPVTPASSKTGSAVQSSSGFSGTTDFIHLKKH
KAALAAAQYKSSNVSETEPNAVKNQTSSASPLLDSTVVCSTINKANSVGNGQASQTSQPN
YHTKLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVD
KFVKDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIE
EDLKPNGVLSRSAKEKSKLKLQSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEI
GPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAM
SLWTHENYEDDEVDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVRE
MCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMP
TQIIPGSVLTDLLDAMHTLREKYGIKSHCHCTNKQNIQVGNFSAVNGVSQVLQNVLNHSN
KISLCMPESQQQNTPQKPESNGNSSPESDVSTDSKLAPPESQSPLHWLADLAEQKAREEK
KENKEFALEKQIKEEREQDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDA
GIAFAPVYSMGTPSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKENRK
PAMDENNKLYSDIPHSWICEKHILWLKDYKNINNWKLFKECWKHGQPAVVSGVHKKMNIS
LWKADSISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKGGETVVLKLKDC
PSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAA
AKDHDIGTTNLHVEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSS
EIPGALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYG
VKACTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEI
NYDDKLQVKNILYHAVKEMVRALKIHEDQVEAMEEN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctgcaaactttcaaacccctggttgaaaaaagtatacccagttcaatcact
gcagtagaattccttgtagataaacaactggattttttaactgaagatagtgcctttcag
ccctaccaggacgacatagacagcctaaacccagttctcagggacaacccgcaacttcag
gaagaagtgaaagtctgggtaaaggaacaaaaggttcaagagatttttatgcaaggtcct
tattccttgaatggatacagagtgagagtatatagacaagactctgccacccagtggttt
actggcataattactcatcatgatctcttcactcgcaccatgatcgttatgaatgatcag
gtactagaaccacagaatgtcgatccttctatggttcaaatgacctttctagatgatgtt
gttcactctttgttaaaaggtgaaaatattggcattacatcacggcgaaggtctcgtgcc
agtcaaaatagcaacactgttcacggtcattatacacgtgcccaagcaaatagtcccaga
ccagcaatgaactcccaagctgctgtaccaaaacagaattcacaccagcaacaaagaaat
attcgtccaaataagaggaagggctcagatagcagtattccagatgaagagaagatgaag
gaggaaaaatatgattatatagcacgaggagaaaatcctaaaggtaaaaacaagcaggtg
atgaacaaaagaaggaaacctgaggaggatgaaaagaaattaaatatgaaaagactacga
accgacaatgtttcagacttttctgagagcagtgactcagaaaattcaaataagagaata
ataaataattcctcagagcagaagccagagaatgagttgaaaaataaaaacacttcaaag
ataaatggagaagacggaaaatcccagaataatgagaaggcaggagaagagacactaata
gatagccagcctccctgggatcaaatacaggaagataaaaaacacgaagaaacagagaaa
cagaagtctgttgactctcagattcaagaaaaaatgattatccgttcgtcagaacaggcc
acactttctgatcgtaattctaatgatttgcttcttcaggaacgcaatatggagaaaaca
cacacagtggaattattaccaaaggagaagtttgtatccagaccacccacaccaaaatgt
gttattgatattacgaatgacattaatgcagaaaaggtggctcaggaaaactcaagtatc
tttggccttcagacacttcagaaaatggatcctaacgttagtgattcaaaacattcagtc
acaaatacaaaatacttggaaacagcaaaccaagattctgaccagagctgggtcagtgat
gtagttaaagtagatttaacccaatcaaatgttaggaatgcttcttcaggaaatgaaaac
ctgaatatggaaaaagagaaaaatcagtatgtctcttatatatcttctctaagtgcagtt
tctgtcacagaagataagctgcataagcgaagtccacccccagaaactataaaatttaaa
cttaatacttcagtagatgctcacaagacaaaatccaatccctcacctgaagttgttaaa
cctaaaattaaccattcccctgattctgtaaagtctaagtccacttttgcaaacagccaa
actgctggtgaaagaagactggcaaataagatagaacatgagttatcaagatgcagcttt
catccggttcctagtagaggcagcacattagaaactacaaaaagccctcttatcattgat
aaaaatgagcatttcacagtttacagagatcctgcacttgtcgggtcagatacaggagct
aatcacatttcacctttcttaagccagcatccttttcctcttcattcttcgtcccataga
acgtgtttaaacccaggcacccaccaccctgccttgagtcccgcaccccacttgctggct
gggtcgtccagtcagaccccactgcccgccattagcgctcaccctctgactggtgcccca
caccactctgttcatcccccccatctactccctgccgtgctacctggagtgcctgctgcc
tccttgctcgggggccacccacgcctggagactgctcatgccagcagcttgagccactta
gcactagcgcaccagcaacagcaacagttgttacagcaccagtcacctcaccttcttgga
caagcccacccatctgcttcatataatcagcttggactttatccaattatttggcaatat
ccaaatggaacacatgcatactcaggacttggtctgccttcttctaagtgggttcaccca
gaaaatgcagttaatgctgaatcttcattaaggaggaattctcccagtccttggttacat
cagcctacccctgtgacctcagcagatggtattggattacttagccacattcctgtcaga
ccttccagtgcagagcctcatcggcctcttaaaattacagcacattccagtccaccattg
acaaaatgtttagtagatcatcataaagaagaattggagaggaaagcttttattgaacca
ttgcgttctgttgcatccacatcagccaaaaatgacctggatctaaataggtcacagacg
ggaaaagatggtcacttgcataggcattttgtggatcctgtattgaatcaattacagaga
ccaccccaggagactggagagagattaaacaaatataaggaggaacaccgtcgaattctt
caagaaagtattgacgttgctccctttacaactaaaatcaaggggcttgagggtgagaga
gagaattattccagagtagcatcatcatcttctagccctaaaagtcatgtcatcaaacaa
gacaaagatgtagaatgttcagtatcagatctttataagatgaagcattcagtgcctcag
agtttgcctcaaagtaactatttcactacattgtctaatagtgtagtcaatgaaccacca
aggtcatacccctccaaagaggtttcaaatatttacactgaaaaacagagtaataccctt
ggagcagcagcagctaatccgcagactctgacttcatttatatcatctctttcaaagcct
ccacctttgattaaacaccaaccggaaagtgaagtaaacttagtaggcaagataccagaa
catcttccccatcaaattgctgctcactcagtaacaactttcagaaatgactgtaggagt
cctactcatttgacagtttcttctacaaatacactccggagtatgcctgctttacataga
gcacccgtatttcacccaccaatccatcatagcctggagagaaaggaaagcagctatagt
agcctttcccctccaacattaactccagtgttgcccgtaaatgctggtgggaaggttcaa
gaatcacaaaagcctccaactctgattcctgagcctaaagacactcaggcaaattttaag
agttcttctgaacagagtttgacagaaatgtggaaatctaataataacctcagcaaagag
aaagctgaatggcatgtggagaaaagcagcggaaagtcacaggctgctatggcatctgtc
attgtacgtccaccttctagtacaaaacttgatagcatgccagcaatgcagttagcttcc
aaagatcgagttagtgaaagatcttcaattggggcaaatcaaacagattgccttaaatca
gcagaagctggagagagtggaagaatcattctgccaagtgtgaattcagacagtgctcac
ataaaatccgaaaaaaactttcaggctgtctcacagggcagtgttcccagttcagtcatg
tctgctgtaaatacaatgtgtaataccaaaacggatatattcacatctgctgccactacc
accagtgtttccagctggggtggttcagaaataatttactctttatcaaataccattttg
gcctctaaatctttagaatgtacctcttcgaaaagtgtcagtcattcagtggctcagaca
ctagaatgcagggtcagcacgacagctccagttacaccagccagtagtaagacaggaagt
gctgttcaatccagctctgggttctcaggcacaactgattttatccatttaaaaaagcac
aaggcagcactggctgcagctcagtataaaagtagtaatgtcagtgagactgagcctaat
gctgtgaaaaatcagacatcttcagcctcccctctcttggatagcactgtagtctgtagt
acaattaacaaagcaaactctgtaggaaatgggcaagcatcccagacgagtcaaccaaac
taccatactaaactgaaaaaggcctggcttacaagacattcagaagaagataaaaatact
aataaaatggaaaattcagggaattctgtatcagaaattattaagccatgttctgtcaat
ttaatagcctctacatcgaatgatctgcaaaatagtgtagatagtaagatcatagttgat
aaatttgtaaaagatgataaagtcaataggagaaaagccaaacgaacttatgaatctggc
tctgaaagtggagattcagatgaaagtgaaagcaaatcagagcaaaggactaaaaggcaa
cctaagccaacttacaaaaagaagcaaaatgatcttcagaagagaaaaggtgaaatagaa
gaagatttaaaacccaatggggttctcagcaggagtgccaaagaaaaaagtaaattgaag
ttgcagagcaacaataatagtgctggcatccctcgttcagtattaaaagactggcgtaaa
gtcaagaagctgaagcaaactggggaatcctttttacaggatgactcctgctgtgagata
gggcctaatttgcaaaagtgccgagaatgtagacttattcggagtaagaagggggaagaa
ccaactcactcaccagtgttttgtagattttactactttagacgattgtcttttagtaaa
aatggagtggttagaatagatggcttctcttctcctgaccaatatgatgatgaagctatg
agtctatggacacatgaaaattatgaagatgatgaagtagacatagaaacttcaaaatac
atcttggatataataggtgataagttctgtcagttagtaacatctgaaaaaacagctttg
tcctgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgagaggagtccgggag
atgtgtgatgcgtgtgaagcaacattgtttaacattcattgggtttgtcagaaatgtgga
tttgtggtctgcttagattgttacaaggcaaaggaaaggaagagttctagagataaagaa
ctgtatgcttggatgaagtgtgtgaagggacagcctcacgatcacaaacatttaatgcca
actcaaattatacctggttctgtcttgacagatcttctagatgcgatgcacactcttaga
gaaaaatatggtattaaatcccattgtcattgtactaacaaacagaatatacaagttgga
aatttttctgctgtgaatggtgtgtctcaagttttacagaatgttcttaatcacagtaat
aaaatttctctgtgcatgcctgagtctcagcagcaaaatacccctcagaagccagagagt
aatggcaacagcagcccagagagtgatgtaagcacagacagcaagttagctcctccagaa
tcccagtctccactacactggctagccgaccttgcagagcaaaaggccagagaggaaaaa
aaagaaaacaaagaatttgcccttgaaaagcaaattaaagaagagagagaacaagacaac
cctgattctcccaatagcagaacatcacctcctgtgtcccagaataatgaacaaggctca
acattacgagatttgctgaccacaacagctggcaagctacgtgtgggttctacagatgct
ggcattgcctttgcaccagtttattcaatgggaacccccagtggtaaaagtggaaggact
atgccaaacattcttgatgacataattgcttcagttgttgaaaacaaaattccaccaaat
aaagcctctaagataaatgtaaaaccagagctcaaagaagaacctaaagaaaacagaaaa
cctgccatggatgaaaacaataaattgtacagtgatataccacattcttggatctgtgag
aagcatattctgtggcttaaggattataaaaatattaataattggaagcttttcaaagag
tgttggaaacatggacaacctgcagtggtttctggtgtgcataagaaaatgaacattagc
ttgtggaaggcggactcaattagtcttgattttggagaccaccaggctgatctcctgaac
tgcaaagacagcattatttcaaatgccaatgttaaggaattctgggatggttttgaagaa
gtttcaaaacggcaaaaaacgaaaggtggagaaacagttgttttaaaactgaaagattgc
ccttcaggagaagacttcaagactatgatgccagcaagatatgaggatcttttaaaaagc
ctgccattgccagaatattgtaatccagaaggaaaattcaatttggcctctcatttgcca
ggattttttgtacgccctgatctaggacccaggttgtgcagtgcttatggtgtagctgct
gctaaagatcatgatataggaacaacaaatctacatgttgaagtttctgatgttgtaaat
attctagtctatgttggcatagcaaaaggaaatggcattctctcaaaagcaggaatactt
aagaaatttgaagaagaagatttggatgacattttaagaaaacgattgaaggactcaagt
gaaatacctggtgctctgtggcatatttatgctgggaaagatgttgacaagataagggaa
tttcttcagaagatttcaaaagaacaaggccttgaagttttaccagaacacgatccgatt
cgtgaccagagttggtatgtgaacaaaaagcttcgccaaagactgcttgaggaatatgga
gtcaaagcctgcactcttattcagttccttggtgatgccattgtcttaccagcaggagca
cttcatcaggtacagaattttcacagctgtattcaggtaactgaagactttgtgtctcca
gaacatctagtacagtcatttcatttaacacaagaactgaggcttttgaaggaagaaatc
aattatgatgataagctacaggttaaaaatatcttgtatcatgcagtcaaggaaatggtg
agagctttgaagatacatgaagatcaagtagaggctatggaagaaaattag
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integrated database retrieval system
