Physeter macrocephalus (sperm whale): 102980485
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Entry
102980485 CDS
T06011
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102980485 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102980485 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcad03310
]
102980485 (RORB)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102980485 (RORB)
Nuclear receptors [BR:
pcad03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102980485 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7217
Motif
Other DBs
NCBI-GeneID:
102980485
NCBI-ProteinID:
XP_007112704
Ensembl:
ENSPCTG00005001849
UniProt:
A0A2Y9F1M5
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All DBs
Position
9:complement(37423212..37607963)
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQRLQEQRQQQSGEAEALAR
VYSSGLSNGLSNLNNEAGGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNSGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
IHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtaataccatgcaaaatttgtggcgataaatcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttagaaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgtg
aagtttgggaggatgtccaagaagcaaagggacagcctgtacgctgaggtgcagaggcac
cagcagcggctgcaggagcagcgacagcagcagagtggggaggcggaagccctcgccagg
gtgtacagcagcggcctcagcaacggcctcagcaacctgaacaacgaggccggtggcacc
tatgccaacggacacgtcattgacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagttctttcaacagt
gggcagttagcgccagggataacgatgactgaaatcgatcgaattgcgcagaacatcatt
aagtcccatctggagacatgtcaatacaccatggaggagctacaccagctggcgtggcag
atccacacgtatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagatcactcacgccatccaatatgtggtagagtttgcaaagcgaata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaagaagagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaagtga
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