KEGG   Physeter macrocephalus (sperm whale): 102980485
Entry
102980485         CDS       T06011                                 
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102980485 (RORB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcad03000]
    102980485 (RORB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pcad03310]
    102980485 (RORB)
Transcription factors [BR:pcad03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    102980485 (RORB)
Nuclear receptors [BR:pcad03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   102980485 (RORB)
SSDB
Motif
Pfam: zf-C4 Hormone_recep DUF7217
Other DBs
NCBI-GeneID: 102980485
NCBI-ProteinID: XP_007112704
Ensembl: ENSPCTG00005001849
UniProt: A0A2Y9F1M5
LinkDB
Position
9:complement(37423212..37607963)
AA seq 459 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQRLQEQRQQQSGEAEALAR
VYSSGLSNGLSNLNNEAGGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNSGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
IHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgagcacaaattgaagtaataccatgcaaaatttgtggcgataaatcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttagaaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgtg
aagtttgggaggatgtccaagaagcaaagggacagcctgtacgctgaggtgcagaggcac
cagcagcggctgcaggagcagcgacagcagcagagtggggaggcggaagccctcgccagg
gtgtacagcagcggcctcagcaacggcctcagcaacctgaacaacgaggccggtggcacc
tatgccaacggacacgtcattgacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagttctttcaacagt
gggcagttagcgccagggataacgatgactgaaatcgatcgaattgcgcagaacatcatt
aagtcccatctggagacatgtcaatacaccatggaggagctacaccagctggcgtggcag
atccacacgtatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagatcactcacgccatccaatatgtggtagagtttgcaaagcgaata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaagaagagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaagtga

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