Physeter macrocephalus (sperm whale): 102980541
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Entry
102980541 CDS
T06011
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102980541 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102980541 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102980541 (NUP54)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102980541 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
102980541
NCBI-ProteinID:
XP_023971194
Ensembl:
ENSPCTG00005005233
UniProt:
A0A2Y9S5L1
LinkDB
All DBs
Position
7:complement(66688155..66726288)
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AA seq
509 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPAGGFSGFGTPSTTAGSAFSFSAPANTGTTGLFGGAQNKG
FGFGTGFGTTAGTSTGLGTGLGTGLGFGGFHTQQQQQQQTTLGGLFSQPTQAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNSNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
GELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcgggcacctctggtaccgctgcagccaccgcggcc
cccgcgggtgggtttagtggatttgggacaccgtctacaacagcaggttctgcgttcagc
ttttctgctccagctaacacgggcactactggactcttcggtggtgctcagaacaaaggt
tttggatttggcactggctttggcacaacagctggaactagtactggtttaggtactggt
ttgggaactggacttggatttggaggatttcatacacagcagcagcagcagcaacaaact
acattaggtggtctcttcagccagcctacacaagctcctgcccagtccaaccaactgata
aatactgcaagtgctctttctgctccaacactactgggagatgagagagatgctattttg
gcaaaatggaatcaactacaggccttttggggaacaggaaaaggatatttcaacagtaac
attccaccagtggaattcacacaagaaaacccattttgtcgttttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcaacagcagttggtagaatcattgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagct
acaacactatatgcccattttgaacaaaccaatataaaaacacagttgcagcaacttggt
gtaaccctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacag
aatcctcctgctggtgttgatccaataatctgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagaacttcttcgaagactgaag
gttcaagatcagatgactaagcagcatcagaccagattagatatcatatctgaagatatt
ggtgaattacagaagaatcaaactacaactatggccaaaattgcacaatacaagaggaaa
ctcatggacctttcccatagaaccttacaggtcctaatcaaacaggaaattcagaggaag
agtgggtatgccatccaagctgatgaagagcagttgcgagttcagctagatacaattcag
tgtgaactaaatgcccctactcagtttaagggccgactgaatgaactgatgtcccaaatc
aggatgcagaatcattttggagcagtcaaatctgaagaaagatattacatagatgcagat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacttagaagatatcaagttggtagaacatggattgaatgaaacc
atccacatcagaggtggtgtcttcagttga
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