KEGG   Physeter macrocephalus (sperm whale): 102980541
Entry
102980541         CDS       T06011                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
  KO
K14308  nuclear pore complex protein Nup54
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03013  Nucleocytoplasmic transport
pcad05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102980541 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102980541 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102980541 (NUP54)
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102980541 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 102980541
NCBI-ProteinID: XP_023971194
Ensembl: ENSPCTG00005005233
UniProt: A0A2Y9S5L1
LinkDB
Position
7:complement(66688155..66726288)
AA seq 509 aa
MAFNFGAPSGTSGTAAATAAPAGGFSGFGTPSTTAGSAFSFSAPANTGTTGLFGGAQNKG
FGFGTGFGTTAGTSTGLGTGLGTGLGFGGFHTQQQQQQQTTLGGLFSQPTQAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNSNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
GELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccctcgggcacctctggtaccgctgcagccaccgcggcc
cccgcgggtgggtttagtggatttgggacaccgtctacaacagcaggttctgcgttcagc
ttttctgctccagctaacacgggcactactggactcttcggtggtgctcagaacaaaggt
tttggatttggcactggctttggcacaacagctggaactagtactggtttaggtactggt
ttgggaactggacttggatttggaggatttcatacacagcagcagcagcagcaacaaact
acattaggtggtctcttcagccagcctacacaagctcctgcccagtccaaccaactgata
aatactgcaagtgctctttctgctccaacactactgggagatgagagagatgctattttg
gcaaaatggaatcaactacaggccttttggggaacaggaaaaggatatttcaacagtaac
attccaccagtggaattcacacaagaaaacccattttgtcgttttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcaacagcagttggtagaatcattgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagct
acaacactatatgcccattttgaacaaaccaatataaaaacacagttgcagcaacttggt
gtaaccctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacag
aatcctcctgctggtgttgatccaataatctgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagaacttcttcgaagactgaag
gttcaagatcagatgactaagcagcatcagaccagattagatatcatatctgaagatatt
ggtgaattacagaagaatcaaactacaactatggccaaaattgcacaatacaagaggaaa
ctcatggacctttcccatagaaccttacaggtcctaatcaaacaggaaattcagaggaag
agtgggtatgccatccaagctgatgaagagcagttgcgagttcagctagatacaattcag
tgtgaactaaatgcccctactcagtttaagggccgactgaatgaactgatgtcccaaatc
aggatgcagaatcattttggagcagtcaaatctgaagaaagatattacatagatgcagat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacttagaagatatcaagttggtagaacatggattgaatgaaacc
atccacatcagaggtggtgtcttcagttga

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