Physeter catodon (sperm whale): 102980648
Help
Entry
102980648 CDS
T06011
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04371
Apelin signaling pathway
pcad04613
Neutrophil extracellular trap formation
pcad05034
Alcoholism
pcad05203
Viral carcinogenesis
pcad05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102980648 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102980648 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102980648 (HDAC4)
05203 Viral carcinogenesis
102980648 (HDAC4)
09165 Substance dependence
05034 Alcoholism
102980648 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980648 (HDAC4)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102980648 (HDAC4)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102980648 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102980648
NCBI-ProteinID:
XP_028339101
Ensembl:
ENSPCTG00005011238
UniProt:
A0A455B500
LinkDB
All DBs
Position
2:complement(136918732..137178006)
Genome browser
AA seq
1103 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLSPARVNHMPGSADVASALPLPAAPPAVPTDLRLDHQFPLP
TTEPGVRERQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIRQQQELLA
VKHQQELLEHQRKLERHRQEQELEKQHREQKLQRLRNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASVSYSHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNASAENGIAPAVPSIPTETSLAHRLVTREGSVGPLPLYTSPSLPNITLGLPA
TGPSAGAASQQEAERLALPALQQRISLFPGTHLTPYLGSAPLERDSGAAPSSLLQHVVLL
EQPPAQTPLVADRYLAGLGALPLHAQPLVGAERVSPSVHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVVQQQHQQFLEKHKLHLSKQALLLEQQRVHQLRSYQASMEAAGIPVSLGGHRPLS
RAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSR
LQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNPLNRQKLDSKKLLGSLTSVFVR
LPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEEST
PMGFCYFNSVAVAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDG
NFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVL
VSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEAC
VSALLGNELDPLPEKVLQQRPNANAVRSMEKVIEIQSKWPGPVLSWETLLGERPKGGGRT
PWPRLPPLGFCLSRCQLLPQADMTGTCVQLECNELAETLVLPPFISPHPATLVSSAPLYG
VKELRLKESVRSLALGPQLAGGDLRVSLCPRVWPLPLDQRIPPHSSEDPQPAETQRRVQP
PSRPAWGPPALPSSHSCLSWSSG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttccggccgagaccagccagtggagctgctc
agccctgcccgcgtgaaccacatgcccggctcggcggatgtggcctcggcgctgcctttg
ccagcggcacccccggcggtgcccacggacctgcgcctggaccaccagtttccgctgccc
acgacggagcccggcgtccgggaacggcagctgcagcaggagctcctggccctcaagcag
aagcagcagctccagaggcagatcctcatcgccgagttccagaggcagcacgagcagctg
tcccggcagcacgaagcccagctgcacgagcacatcagacaacagcaggagctgctggcc
gtgaagcaccagcaggagctgctggaacatcagcggaagctggagaggcaccgccaggag
caggagctggagaagcagcaccgagagcagaagctgcagcggctcaggaacaaggagaaa
ggcaaagagagtgctgtggccagcacagaagtgaagatgaagctacaggagtttgtcctc
aataaaaagaaggcgctggcccaccggaacctgaaccactgcatgtccagtgaccctcgc
tactggtatgggaagacgcagcacagctccctggaccagagctccccgccccagagcggg
gcgtcggtctcctacagccacccggtcctgggcatgtacgacgccaaagatgactttcct
ctcagaaagacagcttctgaacccaatctgaaattacgctccaggctaaagcagaaagtg
gctgaaagacggagcagccccctgttgcgcaggaaagacgggccagtggtcacggctctc
aaaaagcgtcctttggacgtcacagactcggcctgcagcagcgccccgggctctgcaccc
agctcacccaacaacagctctgggaacgccagcgcggagaatgggatcgcgcccgctgtc
cccagcatcccgaccgagaccagcctggcgcacagactggtgacgcgagaaggctcggtg
ggcccgctgcccctgtacacgtcaccatccctgcccaacatcacgctgggacttcccgcc
accggcccctccgcgggggcggccagccagcaggaggccgagagactggccctcccagcc
ctccagcaacgcatctccctcttcccgggcacccacctcaccccctacctgggcagcgca
cccctggagcgcgactcgggggcggctcccagctcccttctgcagcacgtggtcctcctg
gagcagccgcccgcgcagacgcccctcgtcgcagaccgctaccttgcaggcctgggagcg
ctgcccctgcacgcgcagcccctggtgggggcggagcgcgtgtccccgtcggtgcacaag
ctgcggcagcaccgcccgctgggccgcacgcagtcggcgccgctgccccagagcgcgcag
gcgctgcagcacctggtggtccagcagcagcaccagcagttcctggagaagcacaagctg
cacctcagcaagcaagccctcctcctggagcagcaacgggtccaccagctgaggagctac
caggcgtcgatggaggcggccggcatccccgtgtccctcggcggccaccggcctctgtcc
cgggcgcagtcctcccccgcgtccgccaccttccccatgtctgtgcaggagcccccgacc
aagccgcggttcaccacaggcctcgtgtacgacacgctgatgctgaagcaccagtgcgcc
tgcgggaacaccaacagccaccccgagcacgccgggcgcatccagagcatctggtcccgg
ctgcaggagaccggccttcgaggcaaatgcgagtgtatacgcggacgcaaggccaccctg
gaggagctgcagacagtgcactcagaggcgcacgccctgctctacggcacaaaccccctc
aacaggcagaaactggacagtaagaaacttctaggctcgctgacgtcggtgtttgtcagg
ctgccctgcggtggtgtcggggtggacagtgacaccatatggaacgaggtccactcgtcg
ggggcggcccgcctggccgtgggctgtgtggtggagctggtcttcaaggtggccacgggg
gaactgaagaatggctttgccgtggtccgccccccaggacaccacgcggaggagagcacg
cccatggggttctgctacttcaattccgtggccgtcgcagccaagctgctccagcagagg
ctaagtgtcagcaagaccctcgtggtggactgggacgtgcaccacgggaacgggacccag
caggccttctacagtgaccccagcgtcctgtacatctcgctgcaccgctacgacgacggg
aacttcttcccgggcagcggggcgcctgacgaggtgggcacggggcccggcgtgggcttc
aacgtcaacatggctttcaccggcggccttgacccccccatgggagacgcagagtacttg
gcggccttcaggactgtggtcatgccgatcgccaacgagtttgccccagacgtggtgctg
gtgtcatcgggcttcgacgccgtggagggccaccccacgcccctcggaggctacaacctc
tccgccaaatgtttcgggtacctgacgaagcagctgatgggcttggctggcggccggatc
gttctggcgctggaggggggccacgacctcacagccatttgcgacgcctcggaagcctgc
gtctctgctttgctgggaaacgagcttgatcctctcccagaaaaggttttacagcagaga
cccaatgcgaacgccgtccggtcgatggagaaggtcattgaaatccagagtaagtggcct
ggtccggtgctcagctgggagaccctcctgggggagagacccaagggaggagggaggacc
ccgtggccccgtctcccacccctgggcttctgtctctctcgctgccagctgcttccccag
gccgacatgacagggacttgcgttcagctagaatgcaacgagctggcagagactctcgtt
ttacccccgttcatttccccacaccctgctacactcgtgtcatcggctccgctttatggg
gtgaaagaactgaggctcaaggagtctgtgaggtcacttgctctgggtccccagctggca
gggggggacttgcgtgtgagcctgtgtccccgggtctggcctctacccctggaccagagg
atcccaccccatagctcagaagaccctcagcccgcagagacccagcgccgggtgcagccc
ccttcccggccggcctgggggcctcctgccctgccctcatcacacagctgcttgtcctgg
tcttcggggtga
DBGET
integrated database retrieval system