Physeter macrocephalus (sperm whale): 102980779
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Entry
102980779 CDS
T06011
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102980779 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcad04515
]
102980779 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcad00537
]
102980779 (CNTN1)
Cell adhesion molecules [BR:
pcad04515
]
Immunoglobulin superfamily
Contactins
102980779 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pcad00537
]
Others
102980779 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
ChitinaseA_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
102980779
NCBI-ProteinID:
XP_023978699
Ensembl:
ENSPCTG00005017912
UniProt:
A0A2Y9SSI5
LinkDB
All DBs
Position
6:complement(97189628..97422146)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKMWLLVNYLVIVSFTTCLSEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGK
VSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYSYHRGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFLWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
VYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVW
SFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVGLTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPMIE
GNMEAARAVDLIPWMEYEFRVLATNTLGIGEPSIPSSKIKTDGAAPNVAPSDVGGGGGSN
RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAF
QVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEHVVENIVESY
QIRYWAVHDKEAAAHRVQVTSQEYSARLENLLPDTQYFMEVRACNSAGCGPPSDMIETFT
KKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGASILSPCLLGSLLPALGILVYLEF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgctggtcaattaccttgtgattgtatcttttacaacctgtctatca
gagtttacatggcacagaaggtatggtcacggagtttctgaggaagacaaaggatttgga
ccaatttttgaagaacaaccaatcaataccatttatccagaggagtcaccggaaggaaaa
gtttcactaaactgtagggcacgagccagccctttcccagtttacaagtggagaatgaat
aatggggatattgatctgacaagtgatcggtacagtatggtaggaggaaaccttgttatc
aacaatcctgacaaacagaaagatgctggagtatattactgtttagcatcaaataactac
ggaatggtcagaagcactgaagcaaccttgagctttggatatcttgatcctttcccacct
gaggaacgtcccgaggtcagagtgaaagaagggaaaggaatggtgctgctctgtgaccct
ccataccatttcccagatgatcttagctaccgctggcttctaaatgaatttcctgtattt
atcacaatggataaacgaagatttgtgtctcagacaaatggcaatctctacattgctaat
gttgaggcatcagacaaagggaattattcctgctttgtatccagtccctctattacaaag
agtgtgttcagcaaatttatcccactcattccactacctgaacgaacaacaaaaccatat
cctgctgatattgtagttcagttcaaggacatatatgcattgatgggccaaaatgtgact
ttagagtgttttgcacttggcaatcctgttcctgatatccgttggcggaaggtcctagaa
ccaatgccaagcacagctgagatcagcacctctggagctgtcctgaagatcttcaatatt
cagctagaagatgaaggcacatatgaatgtgaggctgagaacattagaggaaaggataaa
caccaggcaagaatttatgttcaagcatttcctgagtgggtagaacacatcaatgacaca
gaggtggatataggcagtgatctctactggccttgtgtggccacagggaagcccatccct
accatccgatggctgaagaatggatattcgtatcatagaggggaattgagactgtatgac
gtgacctttgaaaatgctggcatgtatcagtgcatagctgaaaatacacatggagccatt
tatgcaaacgcggagttgaagatcttggctttggctccaacttttgaaatgaatcctatg
aagaaaaagatcctggctgctaaaggaggaagagttataattgaatgcaaacctaaagct
gcacccaaaccaaaatttttatggagtaaaggtacagagtggcttgtcaatagcagcaga
atactcatttgggaagatggcagcttggaaatcaataacattacaaggaatgatggaggt
gtctatacatgttttgtagaaaataataaagggaaggctaatagcactgggactcttgtt
atcacagatcccacacgaattatattggctccaattaatgccgatatcaccgttggagaa
aatgcaaccatgcagtgtgccgcttccttcgatcctgcactggatctcacatttgtttgg
tccttcaatggctatgtgatcgactttaacaaagagaacattcattaccagcggaatttt
atgctggattccaatggggagctgctcatccgaaatgcccagctaaaacacgctgggagg
tacacgtgcaccgctcagacaattgtggacaattcttcagcctcagctgaccttgttgtg
cgaggccctccaggtcctccaggtggtctgcgaatagaagacattagggccacttctgtg
ggacttacttggagccgtggttcagacaatcatagtcctatatctaaatacactatccag
accaagactattctttcagatgactggaaagatgcaaagacggatcccccaatgattgaa
ggaaatatggaggcagcaagagcagtggatttaatcccgtggatggaatatgaatttcgt
gtgctagcaaccaatacattgggtataggagagcccagtataccatcaagcaaaattaaa
acagatggtgctgcacctaatgtggctccttcagatgtaggaggtgggggtggaagcaac
agagaactgaccataacatgggcgcctttgtcaagagaataccactacggcaacaatttt
ggttacatagtggcatttaagccatttgatggggaagaatggaaaaaagtgacagttact
aacccagatactggccgctacgttcataaagatgagaccatgcgcccttccactgcattt
caagtcaaagtcaaagctttcaacaacaaaggagatggaccatacagcctcacagccgtc
atccactccgcgcaagatgctcccagtgaagccccaacagcagtaggcgtaaaagtctta
tcatcttctgagatatctgttcattgggagcatgttgtagaaaatatagtggaaagctat
cagattcggtattgggctgtccatgataaagaagcagctgcacacagagtgcaagtcact
agccaagaatactctgccaggctggagaaccttctgcctgacacccagtactttatggaa
gtcagggcctgcaatagcgcagggtgtggacctcccagtgatatgattgagaccttcacc
aagaaagcacctccaagccagcctccaaggatcatcagttccataaggtctggttcacgc
tacataatcacctgggatcatgtggttgcactatcaaatgaatccacagtgacaggatat
aaggtactctatagacctgatgggcagcatgatggcaagctgtattcaactcataaacac
tccatagaagtcccaatccccagggatggagaatatgttgtagaggttcgtgcacacagt
gatggaggagatggagtggtgtctcaagtcaaaatttcaggtgcatccatcctatcacca
tgtcttcttggctccctgctgcctgcccttggcatccttgtgtacttggaattctga
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