Physeter macrocephalus (sperm whale): 102980789
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Entry
102980789 CDS
T06011
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00310
Lysine degradation
pcad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102980789 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980789 (SMYD1)
Enzymes [BR:
pcad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
102980789 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
102980789 (SMYD1)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102980789 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
DUF3369
TPR_12
Motif
Other DBs
NCBI-GeneID:
102980789
NCBI-ProteinID:
XP_007102602
Ensembl:
ENSPCTG00005006369
UniProt:
A0A2Y9EIX6
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All DBs
Position
12:11473111..11506499
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AA seq
490 aa
AA seq
DB search
MTIGGMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLVNVVCHTCFQRQE
KLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARVMWRVEREGSG
LTEGCLVSVDDLQNHVEHFGEEARKELRGDVDTFLLYWPPQSQQFSMQYISRIFGVINCN
GFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALG
KISEGEELTVSYIDFLNVSEERKKQLKRQYYFDCTCEHCQRGLKDELFLGVKDDPKPSQE
VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRKCLQKQETVFADTNIYLLRMLSTVSEV
LSYLQAFEEASHYARRMVDGYMKLYHPNNAQLGMAIMRAGLTNWHAGNIEVGHSMICKAY
AILLVTHGPSHPITKDLEAMRMQTEMELRMFHQNEFMYHKMREAALNNQPMQVMAEPSNE
PAPALFHKKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagggggaatggagaacgtggaggtcttcacttctgagggcaaaggcaggggt
ctgaaggccactaaggagttctgggctgctgacgtcatctttgccgagcgggcttattcc
gcagtggtctttgacagccttgtgaatgttgtgtgccatacctgcttccagaggcaggag
aagctccatcgctgcgggcagtgcaaatttgcccattactgtgaccgcacctgccagaag
gatgcttggctgaaccacaagaacgagtgttcggccatcaagagatacgggaaggtgccc
aatgagaacatcaggctggcggcgcgcgtcatgtggcgcgtggagagagagggcagcggg
ctcacggagggctgcctggtctccgtggacgacctgcagaaccacgtggagcacttcggg
gaggaggcacggaaagagctgcgcggggacgtggacactttcctgctgtactggccgccc
cagagccagcagttcagcatgcagtacatctcgcggatcttcggcgtgattaactgcaat
ggtttcacgctcagtgaccagagaggcctgcaggcagtgggtgtgggcatcttccccaac
ctgggcctggtgaaccatgactgttggcccaactgcacggtcatatttaacaacggcaat
catgaggcagtgaaatccatgtttcacacccagatgagaattgaactccgggccctgggc
aagatctcagaaggagaggagctgaccgtgtcctatatcgacttccttaacgtcagcgaa
gaacgcaagaagcagctgaagaggcagtactactttgactgcacgtgtgagcactgccag
agagggctgaaggacgagctcttcttgggtgtgaaagacgacccgaagccctcccaggag
gtggtgaaggagatgatacagttctccaaggatacgctggaaaaaattgacaaggctcgc
tctgagggtttgtaccacgaggttgtgaaattatgccggaagtgcctgcagaagcaagag
acagtgtttgctgacaccaacatctacctgctgcgcatgctgagcaccgtttccgaggtc
ctctcctacctgcaggcctttgaggaggcctcacactacgccaggaggatggtggatggc
tacatgaagctgtatcaccccaacaatgcccagctgggcatggccatcatgcgggcaggg
ctgaccaactggcatgccggcaacattgaggtggggcacagcatgatctgcaaagcctac
gccattctcctggtgacacacggaccctcccaccccatcaccaaggacttagaggccatg
cggatgcagacggagatggagctgcgcatgttccaccagaacgagttcatgtaccacaag
atgcgcgaggccgccctgaacaaccagcccatgcaggtcatggctgaacccagcaatgag
ccggcgccggctctgttccacaagaagcaatga
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