Physeter macrocephalus (sperm whale): 102980976
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Entry
102980976 CDS
T06011
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102980976 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980976 (SUPT6H)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102980976 (SUPT6H)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102980976 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
102980976
NCBI-ProteinID:
XP_028340833
Ensembl:
ENSPCTG00005021917
UniProt:
A0A455AY79
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSISVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQVFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDRSWNMESAQ
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaggtggtgccccgggtcaccaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgaacaaggaaacctgaaaggctttatcaatgac
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcttggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggacgatgacgaagaggaatatggcaaggaggaacat
gaaaaagaagctattgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagagtcagac
attgacgacttcattgtggatgacgatggacaaccactgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggccctgcaagaagcccaggagatttttggtgtggac
tttgactatgacgaatttgagaaatataatgagtatgatgaagaactggaggaagagtat
gagtatgaggacgatgaggctgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcacagatcaggacaatgaaatccgagctactgacctgcctgagaggttccagctc
cgttccatctctgtcaagggggctgaagatgatgaactggaagaagaggctgactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtatgtggagcccgagttgcatatcaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggatccgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgaccctgacaagccccttgctgatggcatc
cgggctctggacaccaccgacatggagaggctcaaggatgtacaatcaatggatgaactg
aaagatgtctacaatcatttcctgctttattatggtcgtgacatccccaagatgcagaat
gccgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaggagcagagagggccagagctcaagcaggcttcccgc
cgagatatgtacaccatctgccagagcgctgggctagatggcttggccaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagttaccagaggcacgagacagag
cagtttcctgcagagcccttggagctggccaaggattatgtctgcagccagttccctaca
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
cttgtccggcaggtgctgaggcaaactttccaggagagagccaagctcaatataaccccc
accaagaaaggtagaaaggatgtggatgaagcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagtttctcaagatatgcctggctgaa
gatgaagggctgctcaccattgacatcagcatagatatgaagggggtggaaggctatggc
aatgaccagacatattttgaagaaatcaaacaattttactaccgagatgagttcagccac
caggtgcaggagtggaatcggcagcgcaccatggccatcgagcgagctttgcagcagttc
ctgtacgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatat
gtcataaaggcctgtagtcggaagctctacaactggttgagggtggcaccctaccggccg
gatcaacaggtagaggaagatgacgactttatggatgagaaccaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccccgtgttctgcgccttggtcaac
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagaacgggagaagaaggctcaagacattgaaactctaaagaaattcctc
ctgaacaagaagcctcatgtggtgacagttgcaggagagaacagggacgcccagatgttg
attgaggatgtgaagcgcattgtgcatgagctggaccagggtcaacagctgtcctctatt
ggtgtggagctgattgacaatgagttggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggcagtctccctggcccggcgtatc
caggaccctctgattgaatttgcccaggtttgcagctctgatgaagacatcctgtgcctc
aagtttcaccccttgcaggagcatgtggtgaaagaagagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcccacccc
tacagccaggccttaattcagtatgtctgtggtctgggacctcgaaaagggacccatctc
ctaaagatcctgaaacagaataacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagcc
gaggatgccaaccctgcaggggcccttgaggagatcttggaaaacccagagcgactcaag
gacctggacttggatgcctttgcggaagaactagagaggcagggttatggtgacaaacac
atcactctgtatgacatccgagcggagctgagctgtcggtataaggacctccggacagcc
tatcgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcattatctgcaacgtcactggcatcgcccacaggcgtccacag
ggtgagagctatgaccaggcaatccgcaacgatgagacagggctatggcagtgccccttc
tgtcagcaggacaatttccctgaactaagcgaggtctggaaccactttgacagtggttca
tgcccgggtcaggccatcggtgtcaaaacaaggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccggaggaacgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacatcgagaagtttagtgcagacctgacc
tgccgcacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tatgactttgatgctgaagcagcagaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatatatcaagcgagtgattgcacacccgtccttccataatataaatttt
aagcaagcagaaaaaatgatggagaccatggaccagggtgatgtgatcatccgaccgagc
agcaagggtgaaaatcacctgacagtgacctggaaggtcagtgacggcatataccagcac
gtggatgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgttcaacctatggca
tcctttgcccgggaccttctgaaccacaagtattatcaggactgcagtggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactccagaaggattccggtaccggggccaaatc
ttcccgactgtgaatggccttttcagatggtttaaggatcattatcaggatcctgtacca
ggcatcacccccagtagcagcagcaggacccggacacctgcctctatcaatgctacccca
gccaacatcaaccttgcagatctgacacgggctgtgaacgccctgccccagaacatgacc
tcacaggtgttcagtgccattgctgctgtgacaggccaaggccagaaccctaatgccacc
ccagcgcagtgggcctccagccagtatggctatggtggcagtggagggggcagcagcgct
taccacgtgttcccgacgccagcccagcagccagtggccacgccactaatgacccccagc
tactcctacacaaccccgagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccacccctcagtctgcccaggcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcggaacag
tggctgcaggagaaggaggcagaacggcggaaacagaagcagcggctgacacctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgatgccaccccactc
ctggacgagatggatcgatcctggaacatggaaagtgctcagtaa
DBGET
integrated database retrieval system
