Physeter macrocephalus (sperm whale): 102981007
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Entry
102981007 CDS
T06011
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102981007 (MMS19)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102981007 (MMS19)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102981007 (MMS19)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102981007 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
102981007
NCBI-ProteinID:
XP_028336692
UniProt:
A0A455AJS7
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All DBs
Position
20:54551193..54579362
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AA seq
872 aa
AA seq
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MRTREEELKGLGADFTFGFIQVMDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVT
SCYFPIDFTPPPNDPHGIQREDLILSLRAVLASTPRFAEFLLPLLTEKVDSEILSAKLDS
LQTLNACCAVYGQKELKDFLPSLWASIRREVFQTASERVEAEGLAALNSLTACLSRSVLR
ADAEDLLDSFLSNILQDCRHHLCEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLL
EQFHTHSQSNQRRTILEMILGFLKLQQKWSYEDKDDRPLSGFKDQLCSLVFMALTDPSTQ
LQLVGIRTLTVLGAQPDLLSSGDLELAVGHLYRLSFLEEDSQSCRVAALEASGTLATLYP
VAFSSHLVPKLAEELGIEESYLARGDGPTKCSRHRRCLQALSAISTHASIVKETLPLLLQ
HLCQMNKGNTVAGTSEVIAVCQSLQQVAEKCQQDPESCWYFHQTAIPCLLALAVQASMPE
KEHSVLKKVLLQDEVLAAMVSVIGTATTHLSPDLAAQSVAHIVPLFLDGNISFLPENSFP
GRFQPFQDGSSGQRRLVALLMAFVCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAAA
KCFAGLLNKHPAGQQLDEFLQLAVDKVEAGLSSGPYRSQAFTLLLWVTKALVLRYHPLSS
CLTDRLMGLLSDPELGPAAADGFSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVR
GFHAAPRDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQ
PLLLEAPQVMSLHVDTLVTKFLNLSSSPSMAVRIAALQCMHAVTHLPTPVLLPYKLQVIR
ALAKPLDDKKRLVRKEAVSARGEWFLLGSPGS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacccgggaagaagagctgaagggcctaggagctgatttcacctttggcttcatc
caggtgatggatggggaaaaggatccccgtaatcttctggtggccttccgcatcgtccat
gacctcatctccagagactatagcctgggaccctttgtggaggagttgtttgaagtgaca
tcctgttacttccctattgattttacccctccacctaatgatccccatggtatccagaga
gaagatctcatcctgagtcttcgagctgtgctggcttctacaccgcgatttgctgagttc
ctgctccccctgctgactgagaaagtggattccgagattctgagtgccaagctggattct
ctgcagactctgaatgcttgctgtgctgtgtacggacagaaagaactaaaggacttcctc
cccagcctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtagag
gccgagggcctggcggcccttaactccctgactgcgtgtttgtctcgctctgtgctgagg
gctgatgctgaggacctccttgactccttccttagcaacattctacaggactgcaggcac
cacctgtgtgaaccagacatgaaactggtgtggcctagtgccaaactgttgcaggcggct
gcaggtgcgtctgcccgggcctgtgaccacatcaccagcaacgtgctgcccctactgctg
gaacagtttcacacgcacagtcagagcaaccagcggcggacaatccttgaaatgatcctg
ggtttcttgaagctgcaacagaaatggagctatgaagacaaggatgacaggcctctgagt
ggcttcaaggaccagctgtgctcactggtattcatggccctgacggaccccagtacccag
cttcagcttgttggcatccgtacactcacagtcttgggtgcccagccagatctcctgtct
tctggggacttggagctggcagtgggtcacctatacagactgagcttcctggaggaggat
tcccagagttgcagggtggcagcactggaagcatcaggaaccctggccactctctaccct
gtggccttcagcagccacctagtgcccaagcttgctgaggagctgggtatagaggagtca
tatttggctagaggggatgggcccaccaaatgctcccggcatcggcgctgtctgcaggcc
ttgtcagctatatccacacatgccagtattgtcaaggagaccctgcctcttctgctgcag
catctctgccagatgaacaaagggaatacggttgcaggaacaagtgaagttattgctgtc
tgtcagagtctccagcaggtggcagaaaaatgccagcaagaccccgagagctgctggtat
ttccatcagacagctataccttgcctgcttgccttggctgtgcaggcttccatgccagag
aaggagcactcagttctgaaaaaagtgctgttgcaggatgaggtcttggccgccatggtg
tctgtcattggcactgccaccacccacttgagccctgacttggctgcccagagcgttgcc
cacattgtgcccctcttcctggatggcaacatctccttcctgcctgaaaacagcttccct
ggcagattccaaccattccaggatggctcctcagggcagaggcggctggttgcactgctt
atggcctttgtctgctccctgcctcgaaatgtggaaatccctcagctgaaccaactcatg
cgggaacttttagagctgagctgctgccacagctgccccttctcctccactgctgctgcc
aagtgctttgcaggacttctgaacaagcatcctgcagggcaacagctggatgaattccta
cagctggctgtggacaaagtggaggctggactgagctctgggccctatcgtagtcaggcc
ttcacactgcttctctgggtcacaaaggccctagtgcttagatatcatcctctcagctcc
tgccttacagaccggctcatgggcctcctgagtgatccagaactaggcccagcagcagct
gatggcttctctctgctcatgtctgactgcactgatgtgctgactcgtgctggccatgct
gaagtgcggatcatgtttcgccagcggttcttcacggataacgtgcctgctctggtccgg
ggcttccatgctgctcctcgagatgtgaagccaaattacctgaagggtctgtctcatgta
cttaacaggctgccaaagcctgtgctcttgccggagctgcccacgctgctttccttgctg
ctggaggccctgtcctgccccgactctgtggtacagctctccaccctcagctgccttcag
cctcttctactggaagcaccccaagtcatgagtcttcacgttgacaccctcgtcaccaag
ttcctaaacctcagctccagcccttccatggctgtccggatcgctgcactgcagtgtatg
cacgctgtcactcacctgcccacccccgtgctgctgccgtacaaactgcaggtgatccgg
gccttagccaaacccctggatgacaagaagagactggtgcgtaaggaagcagtgtcagcc
aggggagaatggtttctgctggggagccctggcagctga
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