Physeter macrocephalus (sperm whale): 102981233
Help
Entry
102981233 CDS
T06011
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X7
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102981233 (TNRC6B)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102981233 (TNRC6B)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102981233 (TNRC6B)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102981233 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
102981233
NCBI-ProteinID:
XP_028346424
Ensembl:
ENSPCTG00005009548
UniProt:
A0A455BBS2
LinkDB
All DBs
Position
6:44804989..45088419
Genome browser
AA seq
1865 aa
AA seq
DB search
MQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKK
KKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSTAPGANPNAQVTGALLQ
NEGGTAPESALGGAAASHYANPTWGPGASSNNGASPNPIHIWDKVIVDGSDMEEWPCIAS
KDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKA
KSVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGNSRKGAL
ETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSS
PNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWSAARGPSGTDTASGQSNSGN
NGNNGKDREDSWKGAPVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTSG
VSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSST
GSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQ
TQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKSSGGWGDAPSQSNQMKSGWGELSA
STEWKDPKNTGGWNDYKNNNSSSWGGGRPDEKTSSSWNENSNKEQGWGGGRQPNQGWTSG
KNGWGEEVDQAKNSNWESSASKPVSGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSTA
WAETGRQPSSWNKQHQQQQQAPQPPPPQPETSGSWGGPAPPAPGNGRPSSSNWSSGPQPV
NPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNL
PTPMTAKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGTTPSSAPNA
MKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASSHSSASWGQGGKKQ
MKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMNLG
DFNDIMRKDRSGFRPPNSKDMGATDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYK
LSPSGSTLPNVSLGAIGTGLNPQNFAARQGGNHGLFGNSTAQSRGVHTPVQPLNSSPNLR
AQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLL
LQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQRQPSMKHSPSHPVGPKPHLD
NMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPS
VATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIG
SKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTG
SNSSLNTSLPSPGAWPYSASDNSFSNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKN
HISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSY
WLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVL
GNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGG
STGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGG
GSDSI
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaatgagggagaagtatcggaagaaagcagttccaaggtggaacaggaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagaaagcaaacaagagaag
gagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataaaaag
aaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaa
ccaagtttaagccaaccaacggccgccagcccgattggcagctctccatcgccaccagtc
aatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcc
cgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgtta
ctaaaacgtgggcagcctcctccaccgtcctgcatgctcctcgggggcggggcggggcct
cctccctccacagcgcccggagcaaaccccaacgcacaagtgacaggagcgctgctgcag
aacgagggtggaaccgcaccagagtcagcccttggaggtgctgctgcttcacattatgca
aatcccacttggggcccgggagcctcctccaacaacggcgcctcccccaaccctattcac
atctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgcattgccagc
aaagacactgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaaccctggc
tctgagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccagtgc
cagtctgcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccctaaggct
aaatctgttcaatcttccaactctactacagaaagcaacaatggactaggaaattggagg
aatgtgagcggtcaggatagaattggacctggctctggcttcagcaactttaacccaaat
agcaacccatctgcctggccagcgctggtccaagaaggaaattctaggaaaggggcattg
gaaacggatactagtaattccagtgcacaggttagcacagtaggtcaggcatccagggaa
cagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacaggct
caaattcataacactgatggaccaaaaaatggaaacactaactccttgaacttaagttca
ccaaaccccatggagaataagggaatgcccttcggaatgggcttggggaacgcctccagg
agcactgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatcttgg
agtgcagctagggggccttctggaactgacacagcctctggacagagcaattctggaaac
aatgggaacaatggaaaggatagagaggactcctggaaaggagctcctgttcagaaatca
accgggtcaaaaaatgactcttgggacaacaataacaggtctacgggtgggtcctggaac
tttggccctcaggactctaatgacaacaaatggggtgaagggaacaaaatgacatctggg
gtctctcagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaatgg
agtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccacccc
ctccctgaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagctccacg
ggaagtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagt
cataattctggccgtcggtcgtacaggcccacacatcctgattgtcaggctgtcttgcag
actcttttgagccgaactgatttggaccccagggtgctctcaaacactggctggggccaa
actcaaattaagcaggacacagtgtgggatattgaagaggtgccaaggcccgaggggaaa
tctgacaaaggaactgaggggtgggagagcgctgccacacagaccaagagctcagggggc
tggggagatgcacccagccaaagcaatcaaatgaagtctggatggggggagctctcagcc
tctacagagtggaaagaccccaagaacacaggaggctggaacgactataagaacaacaac
tcttccagttggggaggaggacgaccagatgaaaagacatcttcctcttggaatgagaat
tccaacaaggagcaggggtggggaggtggacgccagcccaatcaaggatggacttctgga
aagaatggttggggagaggaggtcgatcaggcgaaaaacagcaattgggaaagttctgcc
agtaaacctgtgtctgggtggggtgaaggagggcagaatgaaatcggaacttgggggaac
ggtgggaatgcaagcctggcttcaaaaggcgggtgggaagattgcaaaagatctacagcc
tgggcagagaccggcagacaacccagttcctggaataaacagcaccaacagcagcagcag
gcaccgcagccaccgccaccacaaccagagacttctggttcctggggaggcccagcccca
ccagctccaggcaacggacgaccttccagttccaactggagcagcgggccgcagccagtg
aacccgaaggatgaggagcccagtggctgggaagagccatccccacagtcgatcagtcgg
aagatggacattgacgatggcacgtcagcgtggggtgacccgaacagttacaactataag
aacgtgaatctgtgggataagaattcccaggggggcccagcacctcgagaaccaaacctg
cctaccccgatgaccgctaaatcagcatcagtctggagcaaaagcacaccacctgctcca
gataatggtacttcagcttggggtgagcccaatgaaagcagtcctgggtggggtgaaatg
gatgacacaggagcatcgaccacaggctgggggaccacaccctccagtgctccaaatgcc
atgaaacctaattccaaatctatgcaagacggctggggggagagtgacgggcccgtgaca
ggaactcgccatcccagctgggaagaggaggaggatggaggagtctggaacaccgccggc
tctcagggaagtgcttcctcccacagttcggcaagctggggacaaggaggaaagaaacag
atgaagtgctcactaaaaggaggaaacaatgattcatggatgaatccccttgccaaacag
ttttcaaatatgggattgctgagtcaaactgaagataatccaagtagcaaaatggatttg
tctgtagggagccttccagataaaaaatttgatgtggacaagcgagcaatgaatctcggg
gattttaatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaagac
atgggagccacagatagtgggccttattttgagaagctgactttgcctttctccaatcaa
gatgggtgccttggggatgaggctccctgctctcccttctccccttctcccagctacaag
ctgtctccctctggttccacactacccaacgtcagccttggagcaatcggcacagggctc
aacccccaaaacttcgctgctagacaaggtggcaatcatggtttgtttggaaatagcaca
gcacaatcgagaggcgtgcacacccccgtgcagccgctgaattcttctcctaatctccgg
gcgcaagtgcctccccagttcatttccccccaggtttctgcctcaatgctcaagcagttt
cccaacagtggcctgaatccaggtcttttcaatgtggggccccagttatctcctcaacaa
attgccatgctgagccagcttccacaaattccccagtttcagttggcgtgtcagctgctc
ctgcagcagcagcaacagcagcagttgttacagaaccagaggaagctttcccaagccgtg
cgccagcagcaggagcagcagctggctcgaatggtgagcgccctgcagcagcagcagcag
aggcagcccagcatgaagcattcgccgtctcatcccgttgggcccaagccgcatctggac
aacatggtccccaacgctctaaacgtggggctcccagaccttcagaccaaagggccaata
cctggatatggttctggcttcagctctggcggcatggactacggcatggttggtgggaag
gaggctggaacagagtctcgctttaaacagtggacctccatgatggagggactgccctct
gtagccacacaggaagccaatatgcacaaaaatggcgctatagtggcccctggtaagacc
cgaggagggtcaccatacaaccagtttgatatcatcccgggtgacacactgggtggccat
acgggtcctgctggtgatagctggttacctgccaaatctccaccaacaaataaaatcgga
agtaaatccagcaatgccagttggcctccagaattccaaccaggagtgccatggaaaggt
atccaaaacattgaccctgaatctgacccctatgtcaccccaggaagtgtgctggggggt
acagccacatctcccattgtagatactgaccaccaacttctgcgggataacaccacaggg
tctaattcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctct
gacaactccttcagcaacgttcatagcacttcagcaaagttccctgattacaaatcgaca
tggtccccagatcccataggacacaaccccactcatctctccaacaagatgtggaaaaac
catatttcctcaaggaacactacaccgctgccccgcccacctcccggtctgaccaacccc
aaaccgtcatctccctggagcagcacagcaccccgctcagtcagggggtgggggacacag
gactcacggcttgcctctgcctccacctggagtgatggtggttcagttcgtcctagttac
tggctggttcttcacaatctcactccacagattgatgggtcaaccttgagaaccatctgc
atgcagcatggcccactgctgacattccatctgaaccttacccagggcaccgccctgatc
cgatacagcaccaaacaggaggcggccaaggcccaaactgcactgcacatgtgtgtgttg
ggaaacactaccatcctggctgagtttgccactgatgatgaagttagccgctttctggca
caagctcagccccctacccctgcggcaaccccgagtgcacccgcagcgggttggcagtcc
ctggagaccggccagacccagtcagatcccgtcggacctgctctgaatcttttcggtggg
tccacagggctcgggcaatggagcagcagtgctggtggcagcagcggggccgatcttgct
ggcgcttcattgtggggacccccaaactattcttctagcttgtggggagtcccgaccgtg
gaagacccccataggatgggcagccctgctcctttactacctggtgaccttctgggagga
gggtcggattcaatctga
DBGET
integrated database retrieval system
